Desulfovibrio vulgaris Hildenborough Module 212 Residual: 0.34

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Summary

Residual: 0.34 Score: -69.5782 version: dvh_cmonkey_11_Mar_02

Members

DVU1304 50S ribosomal protein L4

Details for DVU1304 - 50S ribosomal protein L4

GO Terms: GO:0019843, GO:0005840, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1304

Tuberculist Genomic Region

DVU1315 50S ribosomal protein L5

Details for DVU1315 - 50S ribosomal protein L5

GO Terms: GO:0019843, GO:0005840, GO:0003735, GO:0000049, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1315

Tuberculist Genomic Region

DVU1305 50S ribosomal protein L23

Details for DVU1305 - 50S ribosomal protein L23

GO Terms: GO:0000166, GO:0019843, GO:0005840, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1305

Tuberculist Genomic Region

DVU1321 50S ribosomal protein L30

Details for DVU1321 - 50S ribosomal protein L30

GO Terms: GO:0015934, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1321

Tuberculist Genomic Region

DVU1306 50S ribosomal protein L2

Details for DVU1306 - 50S ribosomal protein L2

GO Terms: GO:0015934, GO:0019843, GO:0003735, GO:0016740, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1306

Tuberculist Genomic Region

DVU1322 50S ribosomal protein L15

Details for DVU1322 - 50S ribosomal protein L15

GO Terms: GO:0015934, GO:0019843, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1322

Tuberculist Genomic Region

DVU1307 30S ribosomal protein S19

Details for DVU1307 - 30S ribosomal protein S19

GO Terms: GO:0019843, GO:0015935, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1307

Tuberculist Genomic Region

DVU1302 30S ribosomal protein S10

Details for DVU1302 - 30S ribosomal protein S10

GO Terms: GO:0005840, GO:0003735, GO:0000049, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1302

Tuberculist Genomic Region

DVU1313 50S ribosomal protein L14

Details for DVU1313 - 50S ribosomal protein L14

GO Terms: GO:0015934, GO:0019843, GO:0003735, GO:0006412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1313

Tuberculist Genomic Region

DVU1324 Methionine aminopeptidase

Details for DVU1324 - Methionine aminopeptidase

GO Terms: GO:0046872, GO:0070006, GO:0070084

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1324

Tuberculist Genomic Region

Displaying 1 - 10 of 10

Motifs

Motif 1:

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0063

Transcriptional regulator, MarR family
 up-regulates 0.20

DVU0063

DVU1547

Sensory box protein
 down-regulates -0.28

DVU1547

DVU2086

Transcriptional regulator, GntR family
 down-regulates -0.13

DVU2086

DVU2394

Sigma-54 dependent transcriptional regulator/response regulator
 down-regulates -0.40

DVU2394

DVU2547

Transcriptional regulator, putative
 down-regulates -0.12

DVU2547

DVU2802

Transcriptional regulator, GntR family
 down-regulates -0.29

DVU2802

DVU2894

Sigma-54 dependent transcriptional regulator
 down-regulates -0.14

DVU2894

GO Enrichment

Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005737 cytoplasm 86 1.09 5 0.0005
CC GO:0005622 intracellular 104 1.32 5 0.0012
CC GO:0044424 intracellular part 104 1.32 5 0.0012
CC GO:0005623 cell 145 1.84 5 0.0065
CC GO:0044464 cell part 145 1.84 5 0.0065
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003723 RNA binding 54 0.21 3 0.0007
MF GO:0003676 nucleic acid binding 222 0.87 3 0.0391

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