Desulfovibrio vulgaris Hildenborough Module 213 Residual: 0.39 | Syntrophy Portal

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Summary

Residual: 0.39 Score: -55.3426 version: dvh_cmonkey_11_Mar_02

Members

DVU0183 Methyl-accepting chemotaxis protein Details for DVU0183 - Methyl-accepting chemotaxis protein GO Terms: GO:0006935, GO:0016021, GO:0004871 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0183 Tuberculist Genomic Region	DVU2604 Uncharacterized protein Details for DVU2604 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2604 Tuberculist Genomic Region
DVU1103 Baseplate assembly protein, putative Details for DVU1103 - Baseplate assembly protein, putative GO Terms: GO:0009308, GO:0005507, GO:0048038 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1103 Tuberculist Genomic Region	DVU2689 Bacteriophage DNA transposition B protein Details for DVU2689 - Bacteriophage DNA transposition B protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2689 Tuberculist Genomic Region
DVU2731 Tail fiber assembly protein, putative Details for DVU2731 - Tail fiber assembly protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2731 Tuberculist Genomic Region	DVU2830 Uncharacterized protein Details for DVU2830 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2830 Tuberculist Genomic Region
DVU0039 C4-type zinc finger protein, DksA/TraR family Details for DVU0039 - C4-type zinc finger protein, DksA/TraR family GO Terms: GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0039 Tuberculist Genomic Region	DVU3338 Potassium-transporting ATPase B chain Details for DVU3338 - Potassium-transporting ATPase B chain GO Terms: GO:0005524, GO:0016021, GO:0000287, GO:0005886, GO:0008556 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3338 Tuberculist Genomic Region
DVU1713 Uncharacterized protein Details for DVU1713 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1713 Tuberculist Genomic Region	DVU3339 Potassium-transporting ATPase A chain Details for DVU3339 - Potassium-transporting ATPase A chain GO Terms: GO:0005524, GO:0016021, GO:0005886, GO:0008556 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3339 Tuberculist Genomic Region
DVU2217 Acetyltransferase, GNAT family Details for DVU2217 - Acetyltransferase, GNAT family GO Terms: GO:0008080 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2217 Tuberculist Genomic Region	DVUA0030 Uncharacterized protein Details for DVUA0030 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0030 Tuberculist Genomic Region
DVU2559 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Details for DVU2559 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase GO Terms: GO:0004015, GO:0009102, GO:0005737, GO:0030170 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2559 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 6100 Motif 2:

e-value: 24000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0525 Transcriptional regulator, MarR family	up-regulates	0.23	DVU0525
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.21	DVU1156
DVU2086 Transcriptional regulator, GntR family	up-regulates	0.16	DVU2086
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.25	DVU2114
DVU2894 Sigma-54 dependent transcriptional regulator	up-regulates	0.19	DVU2894

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008080	N-acetyltransferase activity	5	0.02	1	0.0194
MF	GO:0008270	zinc ion binding	6	0.02	1	0.0232
MF	GO:0016410	N-acyltransferase activity	6	0.02	1	0.0232
MF	GO:0008483	transaminase activity	7	0.03	1	0.0271
MF	GO:0016407	acetyltransferase activity	7	0.03	1	0.0271
MF	GO:0016769	transferase activity, transferring nitro...	7	0.03	1	0.0271

Essentiality

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