Desulfovibrio vulgaris Hildenborough Module 244 Residual: 0.50 | Syntrophy Portal

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Summary

Residual: 0.50 Score: -47.5626 version: dvh_cmonkey_11_Mar_02

Members

DVU2198 Uncharacterized protein Details for DVU2198 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2198 Tuberculist Genomic Region	DVU1709 Type I restriction-modification system, M subunit Details for DVU1709 - Type I restriction-modification system, M subunit GO Terms: GO:0003677, GO:0009307, GO:0008170, GO:0009007 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1709 Tuberculist Genomic Region
DVU0909 Uncharacterized protein Details for DVU0909 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0909 Tuberculist Genomic Region	DVU1736 Uncharacterized protein Details for DVU1736 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1736 Tuberculist Genomic Region
DVU0915 Uncharacterized protein Details for DVU0915 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0915 Tuberculist Genomic Region	DVU1988 Membrane protein, putative Details for DVU1988 - Membrane protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1988 Tuberculist Genomic Region
DVU0920 ATP synthase protein I Details for DVU0920 - ATP synthase protein I GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0920 Tuberculist Genomic Region	DVU2249 Uncharacterized protein Details for DVU2249 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2249 Tuberculist Genomic Region
DVU0921 5-nitroimidazole antibiotic resistance protein, putative Details for DVU0921 - 5-nitroimidazole antibiotic resistance protein, putative GO Terms: GO:0010181, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0921 Tuberculist Genomic Region	DVU2250 AMP-binding protein Details for DVU2250 - AMP-binding protein GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2250 Tuberculist Genomic Region
DVU0926 Uncharacterized protein Details for DVU0926 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0926 Tuberculist Genomic Region	DVU2296 Monofunctional biosynthetic peptidoglycan transglycosylase Details for DVU2296 - Monofunctional biosynthetic peptidoglycan transglycosylase GO Terms: GO:0071555, GO:0016021, GO:0009252, GO:0009274, GO:0005886, GO:0008360, GO:0016763 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2296 Tuberculist Genomic Region
DVU0929 GTPase Obg Details for DVU0929 - GTPase Obg GO Terms: GO:0005525, GO:0003924, GO:0005737, GO:0000287 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0929 Tuberculist Genomic Region	DVU2645 Na+/H+ antiporter family protein Details for DVU2645 - Na+/H+ antiporter family protein GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2645 Tuberculist Genomic Region
DVU1098 Methyltransferase Details for DVU1098 - Methyltransferase GO Terms: GO:0003677, GO:0006306, GO:0008170 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1098 Tuberculist Genomic Region	DVU2646 1-aminocyclopropane-1-carboxylate deaminase Details for DVU2646 - 1-aminocyclopropane-1-carboxylate deaminase GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2646 Tuberculist Genomic Region
DVU1707 Uncharacterized protein Details for DVU1707 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1707 Tuberculist Genomic Region	DVU2831 Uncharacterized protein Details for DVU2831 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2831 Tuberculist Genomic Region
DVU1708 Uncharacterized protein Details for DVU1708 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1708 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.0000000065 Motif 2:

e-value: 0.0051

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0277 Transcriptional regulator, AraC family	down-regulates	-0.11	DVU0277
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.20	DVU1561
DVU1754 Uncharacterized protein	up-regulates	0.12	DVU1754
DVU2894 Sigma-54 dependent transcriptional regulator	up-regulates	0.16	DVU2894
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.17	DVU3142

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0071555	cell wall organization	5	0.01	1	0.0140
BP	GO:0071554	cell wall organization or biogenesis	7	0.02	1	0.0190
BP	GO:0045229	external encapsulating structure organiz...	9	0.02	1	0.0240

Essentiality

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