Desulfovibrio vulgaris Hildenborough Module 293 Residual: 0.38 | Syntrophy Portal

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Summary

Residual: 0.38 Score: -80.5245 version: dvh_cmonkey_11_Mar_02

Members

DVU1721 Uncharacterized protein Details for DVU1721 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1721 Tuberculist Genomic Region	DVU1725 Uncharacterized protein Details for DVU1725 - Uncharacterized protein GO Terms: GO:0003677 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1725 Tuberculist Genomic Region
DVU1715 Uncharacterized protein Details for DVU1715 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1715 Tuberculist Genomic Region	DVU2597 Uncharacterized protein Details for DVU2597 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2597 Tuberculist Genomic Region
DVU1717 Uncharacterized protein Details for DVU1717 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1717 Tuberculist Genomic Region	DVU2789 Gpr1/Fun34/YaaH family protein Details for DVU2789 - Gpr1/Fun34/YaaH family protein GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2789 Tuberculist Genomic Region
DVU1718 Uncharacterized protein Details for DVU1718 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1718 Tuberculist Genomic Region	DVUA0007 Nitrogenase cofactor biosynthesis protein NifB Details for DVUA0007 - Nitrogenase cofactor biosynthesis protein NifB GO Terms: GO:0003824, GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0007 Tuberculist Genomic Region
DVU1719 Conserved domain protein Details for DVU1719 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1719 Tuberculist Genomic Region	DVUA0008 Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN, putative Details for DVUA0008 - Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN, putative GO Terms: GO:0009399, GO:0016163 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0008 Tuberculist Genomic Region
DVU1720 Uncharacterized protein Details for DVU1720 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1720 Tuberculist Genomic Region	DVUA0143 Nif-specific regulatory protein Details for DVUA0143 - Nif-specific regulatory protein GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0143 Tuberculist Genomic Region
DVU1723 Uncharacterized protein Details for DVU1723 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1723 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 360 Motif 2:

e-value: 2400

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1063 Transcriptional regulatory protein	up-regulates	0.19	DVU1063
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.11	DVU1517
DVU1561 Molybdenum-binding protein, HTH domain	up-regulates	0.13	DVU1561
DVU2097 Transcriptional regulator, putative	down-regulates	-0.26	DVU2097
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.11	DVU2114
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.14	DVU2832
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.12	DVU3142
[field_regulator_taxonomy_regulat_1]	up-regulates	17.37	Oxygen

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0071941	nitrogen cycle metabolic process	3	0.01	1	0.0081

Essentiality

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