Desulfovibrio vulgaris Hildenborough Module 295 Residual: 0.40

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Summary

Residual: 0.40 Score: -63.0315 version: dvh_cmonkey_11_Mar_02

Members

DVU0538 AP endonuclease, family 2

Details for DVU0538 - AP endonuclease, family 2

GO Terms: GO:0004519

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0538

Tuberculist Genomic Region

DVU2432 Sensory box/GGDEF domain/EAL domain protein

Details for DVU2432 - Sensory box/GGDEF domain/EAL domain protein

GO Terms: GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2432

Tuberculist Genomic Region

DVU1233 Bifunctional uridylyltransferase/uridylyl-removing enzyme

Details for DVU1233 - Bifunctional uridylyltransferase/uridylyl-removing enzyme

GO Terms: GO:0008773, GO:0016597, GO:0006807, GO:0008081, GO:0006808

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1233

Tuberculist Genomic Region

DVU2631 Uncharacterized protein

Details for DVU2631 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2631

Tuberculist Genomic Region

DVU3248 AcrB/AcrD/AcrF family protein

Details for DVU3248 - AcrB/AcrD/AcrF family protein

GO Terms: GO:0016021, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3248

Tuberculist Genomic Region

DVU2637 HAMP domain protein

Details for DVU2637 - HAMP domain protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2637

Tuberculist Genomic Region

DVU0083 Uncharacterized protein

Details for DVU0083 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0083

Tuberculist Genomic Region

DVU2663 Uncharacterized protein

Details for DVU2663 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2663

Tuberculist Genomic Region

DVU0115 Shikimate dehydrogenase

Details for DVU0115 - Shikimate dehydrogenase

GO Terms: GO:0050661, GO:0009073, GO:0009423, GO:0004764, GO:0019632

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0115

Tuberculist Genomic Region

DVU2754 Quinone oxidoreductase

Details for DVU2754 - Quinone oxidoreductase

GO Terms: GO:0003960, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2754

Tuberculist Genomic Region

DVU1265 Uncharacterized protein

Details for DVU1265 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1265

Tuberculist Genomic Region

DVU2777 Uncharacterized protein

Details for DVU2777 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2777

Tuberculist Genomic Region

DVU1761 Uncharacterized protein

Details for DVU1761 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1761

Tuberculist Genomic Region

DVU3249 Lipoprotein, putative

Details for DVU3249 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3249

Tuberculist Genomic Region

DVU2167 Uncharacterized protein

Details for DVU2167 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2167

Tuberculist Genomic Region

Displaying 1 - 15 of 15

Motifs

Motif 1: e-value: 1600 e-value: 6800

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1517

Transcriptional regulator cII, putative
 up-regulates 0.17

DVU1517

DVU1561

Molybdenum-binding protein, HTH domain
 up-regulates 0.12

DVU1561

DVU1754

Uncharacterized protein
 up-regulates 0.13

DVU1754

DVU3142

Sigma-54 dependent transcriptional regulator
 up-regulates 0.18

DVU3142

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016772 transferase activity, transferring phosp... 36 0.14 2 0.0073
MF GO:0008773 [protein-PII] uridylyltransferase activi... 3 0.01 1 0.0117
MF GO:0016651 oxidoreductase activity, acting on NAD(P... 3 0.01 1 0.0117
MF GO:0016655 oxidoreductase activity, acting on NAD(P... 3 0.01 1 0.0117
MF GO:0070569 uridylyltransferase activity 3 0.01 1 0.0117
MF GO:0004519 endonuclease activity 5 0.02 1 0.0194
MF GO:0050661 NADP binding 5 0.02 1 0.0194
MF GO:0016779 nucleotidyltransferase activity 6 0.02 1 0.0232
MF GO:0003824 catalytic activity 427 1.67 4 0.0449
MF GO:0000155 phosphorelay sensor kinase activity 12 0.05 1 0.0460
MF GO:0004672 protein kinase activity 12 0.05 1 0.0460
MF GO:0004673 protein histidine kinase activity 12 0.05 1 0.0460
MF GO:0004872 receptor activity 12 0.05 1 0.0460
MF GO:0016775 phosphotransferase activity, nitrogenous... 12 0.05 1 0.0460
MF GO:0038023 signaling receptor activity 12 0.05 1 0.0460

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