Desulfovibrio vulgaris Hildenborough Module 339 Residual: 0.44

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Summary

Residual: 0.44 Score: -53.5884 version: dvh_cmonkey_11_Mar_02

Members

DVU0371 Uncharacterized protein

Details for DVU0371 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0371

Tuberculist Genomic Region

DVU1166 Uncharacterized protein

Details for DVU1166 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1166

Tuberculist Genomic Region

DVU0554 NAD-dependent epimerase/dehydratase family protein

Details for DVU0554 - NAD-dependent epimerase/dehydratase family protein

GO Terms: GO:0005975, GO:0050662, GO:0016857

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0554

Tuberculist Genomic Region

DVU1167 Uncharacterized protein

Details for DVU1167 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1167

Tuberculist Genomic Region

DVU0555 Uncharacterized protein

Details for DVU0555 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0555

Tuberculist Genomic Region

DVU1277 Uncharacterized protein

Details for DVU1277 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1277

Tuberculist Genomic Region

DVU0556 ISDvu3, transposase OrfA

Details for DVU0556 - ISDvu3, transposase OrfA

GO Terms: GO:0003677, GO:0004803, GO:0006313

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0556

Tuberculist Genomic Region

DVU1832 Uncharacterized protein

Details for DVU1832 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1832

Tuberculist Genomic Region

DVU0558 Uncharacterized protein

Details for DVU0558 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0558

Tuberculist Genomic Region

DVU2010 ISD1, transposase OrfB

Details for DVU2010 - ISD1, transposase OrfB

GO Terms: GO:0015074, GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2010

Tuberculist Genomic Region

DVU0559 Lipoprotein, putative

Details for DVU0559 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0559

Tuberculist Genomic Region

DVU2048 Uncharacterized protein

Details for DVU2048 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2048

Tuberculist Genomic Region

DVU0561 Glycosyl transferase, group 1 family protein

Details for DVU0561 - Glycosyl transferase, group 1 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0561

Tuberculist Genomic Region

DVU2175 Adenine specific DNA methyltransferase, putative

Details for DVU2175 - Adenine specific DNA methyltransferase, putative

GO Terms: GO:0005524, GO:0003677, GO:0008168, GO:0004518

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2175

Tuberculist Genomic Region

DVU0562 ISD1, transposase OrfA

Details for DVU0562 - ISD1, transposase OrfA

GO Terms: GO:0003677, GO:0004803, GO:0006313

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0562

Tuberculist Genomic Region

DVU2827 Sigma-54 dependent transcriptional regulator

Details for DVU2827 - Sigma-54 dependent transcriptional regulator

GO Terms: GO:0005524, GO:0006355, GO:0043565, GO:0004871, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2827

Tuberculist Genomic Region

DVU0923 Endoribonuclease, L-PSP family

Details for DVU0923 - Endoribonuclease, L-PSP family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0923

Tuberculist Genomic Region

DVU3089 Uncharacterized protein

Details for DVU3089 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3089

Tuberculist Genomic Region

DVU1147 Alginate o-acetyltransferase AlgI, putative

Details for DVU1147 - Alginate o-acetyltransferase AlgI, putative

GO Terms: GO:0042121, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1147

Tuberculist Genomic Region

Displaying 1 - 19 of 19

Motifs

Motif 1: e-value: 0.000006 e-value: 0.19

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0063

Transcriptional regulator, MarR family
 up-regulates 0.10

DVU0063

DVU0569

Sigma-54 dependent transcriptional regulator
 down-regulates -0.11

DVU0569

DVU0916

Redox-sensing transcriptional repressor Rex
 up-regulates 0.12

DVU0916

DVU1142

Transcriptional regulator, putative
 down-regulates -0.23

DVU1142

DVU1144

Transcriptional regulator, Cro/CI family
 up-regulates 0.13

DVU1144

DVU1645

Transcriptional regulator, ArsR family
 up-regulates 0.10

DVU1645

DVU2106

Sigma-54 dependent transcriptional regulator
 up-regulates 0.12

DVU2106

DVU2644

Transcriptional regulator, GntR family
 up-regulates 0.14

DVU2644

DVUA0143

Nif-specific regulatory protein
 down-regulates -0.24

DVUA0143

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0015074 DNA integration 3 0.03 1 0.0320
BP GO:0005975 carbohydrate metabolic process 33 0.36 2 0.0420

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