Methanococcus maripaludis S2 Module 53 Residual: 0.26

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.26 Score: -16.2603 version: mmp_cmonkey_11_Oct_11

Members

MMP0200 molybdenum containing formylmethanofuran dehydrogenase, subunit E (NCBI)

Details for MMP0200 - molybdenum containing formylmethanofuran dehydrogenase, subunit E (NCBI)

GO Terms: GO:0018493

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0200

Tuberculist Genomic Region

MMP1526 Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain (NCBI)

Details for MMP1526 - Ribonuclease III family:Double-stranded RNA binding (DsRBD) domain (NCBI)

GO Terms: GO:0016075, GO:0006396, GO:0005622, GO:0004525, GO:0003725

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1526

Tuberculist Genomic Region

MMP0462 possible predicted protein (NCBI)

Details for MMP0462 - possible predicted protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0462

Tuberculist Genomic Region

MMP1620 hypothetical (NCBI)

Details for MMP1620 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1620

Tuberculist Genomic Region

MMP0513 molybdopterin biosynthesis moeA protein (NCBI)

Details for MMP0513 - molybdopterin biosynthesis moeA protein (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0513

Tuberculist Genomic Region

MMP1649 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:TOBE domain (NCBI)

Details for MMP1649 - ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:TOBE domain (NCBI)

GO Terms: GO:0006810, GO:0043190, GO:0005524, GO:0016820, GO:0016887, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1649

Tuberculist Genomic Region

MMP0773 conserved hypothetical archaeal protein (NCBI)

Details for MMP0773 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0773

Tuberculist Genomic Region

MMP0515 Molybdenum ABC transporter, permease protein (NCBI)

Details for MMP0515 - Molybdenum ABC transporter, permease protein (NCBI)

GO Terms: GO:0015689, GO:0016021, GO:0015098

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0515

Tuberculist Genomic Region

MMP0776 conserved hypothetical archaeal protein (NCBI)

Details for MMP0776 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0776

Tuberculist Genomic Region

MMP0767 conserved hypothetical protein (NCBI)

Details for MMP0767 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0767

Tuberculist Genomic Region

MMP0803 conserved archaeal protein (NCBI)

Details for MMP0803 - conserved archaeal protein (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0803

Tuberculist Genomic Region

MMP0769 conserved hypothetical archaeal protein (NCBI)

Details for MMP0769 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0769

Tuberculist Genomic Region

MMP0837 RNase HI related protein (NCBI)

Details for MMP0837 - RNase HI related protein (NCBI)

GO Terms: GO:0016234, GO:0003676, GO:0004523

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0837

Tuberculist Genomic Region

MMP0774 hypothetical protein (NCBI)

Details for MMP0774 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0774

Tuberculist Genomic Region

MMP0838 Protein of unknown function DUF45 (NCBI)

Details for MMP0838 - Protein of unknown function DUF45 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0838

Tuberculist Genomic Region

MMP0790 hypothetical protein (NCBI)

Details for MMP0790 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0790

Tuberculist Genomic Region

MMP0896 Polysaccharide biosynthesis protein (NCBI)

Details for MMP0896 - Polysaccharide biosynthesis protein (NCBI)

GO Terms: GO:0000271, GO:0006855, GO:0016020, GO:0015238, GO:0015297

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0896

Tuberculist Genomic Region

MMP0805 predicted protein (NCBI)

Details for MMP0805 - predicted protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0805

Tuberculist Genomic Region

MMP1339 SAM (and some other nucleotide) binding motif (NCBI)

Details for MMP1339 - SAM (and some other nucleotide) binding motif (NCBI)

GO Terms: GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1339

Tuberculist Genomic Region

MMP0766 Site-specific recombinase (NCBI)

Details for MMP0766 - Site-specific recombinase (NCBI)

GO Terms: GO:0006310, GO:0000150, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0766

Tuberculist Genomic Region

MMP1650 probable amino acid ABC transporter, periplasmic component (NCBI)

Details for MMP1650 - probable amino acid ABC transporter, periplasmic component (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1650

Tuberculist Genomic Region

MMP0782 conserved hypothetical protein (NCBI)

Details for MMP0782 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0782

Tuberculist Genomic Region

MMP0800 Conserved hypothetical Archael protein (NCBI)

Details for MMP0800 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0800

Tuberculist Genomic Region

MMP0796 probable sugar efflux transporter (NCBI)

Details for MMP0796 - probable sugar efflux transporter (NCBI)

GO Terms: GO:0006810, GO:0016021, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0796

Tuberculist Genomic Region

MMP0802 Iron-containing alcohol dehydrogenase (NCBI)

Details for MMP0802 - Iron-containing alcohol dehydrogenase (NCBI)

GO Terms: GO:0008152, GO:0004023, GO:0046872, GO:0004024, GO:0004025

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0802

Tuberculist Genomic Region

MMP1536 conserved hypothetical archaeal protein (NCBI)

Details for MMP1536 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1536

Tuberculist Genomic Region

MMP0823 coenzyme F420-non-reducing hydrogenase subunit alpha (NCBI)

Details for MMP0823 - coenzyme F420-non-reducing hydrogenase subunit alpha (NCBI)

GO Terms: GO:0006118, GO:0008901, GO:0016151

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0823

Tuberculist Genomic Region

MMP0437 putative A. fulgidus predicted coding region AF2307 (NCBI)

Details for MMP0437 - putative A. fulgidus predicted coding region AF2307 (NCBI)

GO Terms: GO:0006750, GO:0004357

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0437

Tuberculist Genomic Region

Displaying 1 - 28 of 28

Motifs

Motif 1: e-value: 560 e-value: 2600

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006575 cellular modified amino acid metabolic p... 3 0.03 1 0.0310
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0008901 ferredoxin hydrogenase activity 3 0.04 1 0.0380
MF GO:0016699 oxidoreductase activity, acting on hydro... 3 0.04 1 0.0380

Comments

Log in to post comments