Methanococcus maripaludis S2 Module 68 Residual: 0.37

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.37 Score: -16.8136 version: mmp_cmonkey_11_Oct_11

Members

MMP0325 Glyceraldehyde 3-phosphate dehydrogenase (NCBI)

Details for MMP0325 - Glyceraldehyde 3-phosphate dehydrogenase (NCBI)

GO Terms: GO:0006096, GO:0005737, GO:0004365, GO:0050661, GO:0051287, GO:0043891

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0325

Tuberculist Genomic Region

MMP0872 Porphobilinogen deaminase (NCBI)

Details for MMP0872 - Porphobilinogen deaminase (NCBI)

GO Terms: GO:0033014, GO:0004418

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0872

Tuberculist Genomic Region

MMP0389 ferredoxin (NCBI)

Details for MMP0389 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0389

Tuberculist Genomic Region

MMP1032 replication protein A (NCBI)

Details for MMP1032 - replication protein A (NCBI)

GO Terms: GO:0003676, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1032

Tuberculist Genomic Region

MMP0966 uroporphyrin-III C-methyltransferase (NCBI)

Details for MMP0966 - uroporphyrin-III C-methyltransferase (NCBI)

GO Terms: GO:0006779, GO:0004851

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0966

Tuberculist Genomic Region

MMP1034 Thymidylate kinase (NCBI)

Details for MMP1034 - Thymidylate kinase (NCBI)

GO Terms: GO:0006233, GO:0006235, GO:0005524, GO:0004798

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1034

Tuberculist Genomic Region

MMP1033 hypothetical protein (NCBI)

Details for MMP1033 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1033

Tuberculist Genomic Region

MMP1075 dUTP diphosphatase (NCBI)

Details for MMP1075 - dUTP diphosphatase (NCBI)

GO Terms: GO:0046080, GO:0004170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1075

Tuberculist Genomic Region

MMP1674 flagella accessory protein H (NCBI)

Details for MMP1674 - flagella accessory protein H (NCBI)

GO Terms: GO:0017111, GO:0000166

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1674

Tuberculist Genomic Region

MMP1076 Bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase (NCBI)

Details for MMP1076 - Bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase (NCBI)

GO Terms: GO:0009058, GO:0019134, GO:0016779, GO:0003977, GO:0008415

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1076

Tuberculist Genomic Region

MMP1676 flagella accessory protein J (NCBI)

Details for MMP1676 - flagella accessory protein J (NCBI)

GO Terms: GO:0009306, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1676

Tuberculist Genomic Region

MMP1077 Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

Details for MMP1077 - Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

GO Terms: GO:0005975, GO:0008966, GO:0005509

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1077

Tuberculist Genomic Region

MMP0230 Conserved hypothetical protein (NCBI)

Details for MMP0230 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0230

Tuberculist Genomic Region

MMP1204 Metallopeptidase family M24:Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase (NCBI)

Details for MMP1204 - Metallopeptidase family M24:Xaa-Pro dipeptidase/Xaa-Pro aminopeptidase (NCBI)

GO Terms: GO:0006508, GO:0004239, GO:0004251

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1204

Tuberculist Genomic Region

MMP0251 proteasome, subunit alpha (NCBI)

Details for MMP0251 - proteasome, subunit alpha (NCBI)

GO Terms: GO:0006511, GO:0005839, GO:0004175, GO:0004298, GO:0004299

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0251

Tuberculist Genomic Region

MMP1205 3-phosphoshikimate-1-carboxyvinyltransferase (NCBI)

Details for MMP1205 - 3-phosphoshikimate-1-carboxyvinyltransferase (NCBI)

GO Terms: GO:0003866

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1205

Tuberculist Genomic Region

MMP0388 geranylgeranyl bacterial chlorophyll reductase related (NCBI)

Details for MMP0388 - geranylgeranyl bacterial chlorophyll reductase related (NCBI)

GO Terms: GO:0006118, GO:0006725, GO:0008033, GO:0004497, GO:0050660, GO:0004148

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0388

Tuberculist Genomic Region

MMP0330 Precorrin-8X methylmutase CbiC/CobH (NCBI)

Details for MMP0330 - Precorrin-8X methylmutase CbiC/CobH (NCBI)

GO Terms: GO:0009236, GO:0016993

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0330

Tuberculist Genomic Region

MMP0428 vanadium nitrogenase-associated related protein N (NCBI)

Details for MMP0428 - vanadium nitrogenase-associated related protein N (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0428

Tuberculist Genomic Region

MMP0926 chemotaxis protein CheB (NCBI)

Details for MMP0926 - chemotaxis protein CheB (NCBI)

GO Terms: GO:0006355, GO:0000160, GO:0006935, GO:0005737, GO:0000156, GO:0008984

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0926

Tuberculist Genomic Region

MMP0516 molybdate transporter subunit (NCBI)

Details for MMP0516 - molybdate transporter subunit (NCBI)

GO Terms: GO:0009435, GO:0004514

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0516

Tuberculist Genomic Region

MMP1266 Glutamyl-tRNA(Gln) amidotransferase subunit D (NCBI)

Details for MMP1266 - Glutamyl-tRNA(Gln) amidotransferase subunit D (NCBI)

GO Terms: GO:0006520, GO:0006450, GO:0050567, GO:0004067

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1266

Tuberculist Genomic Region

MMP0582 AzlC related protein (NCBI)

Details for MMP0582 - AzlC related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0582

Tuberculist Genomic Region

MMP1675 flagella accessory protein I (NCBI)

Details for MMP1675 - flagella accessory protein I (NCBI)

GO Terms: GO:0006810, GO:0005622, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1675

Tuberculist Genomic Region

MMP0583 conserved hypothetical protein (NCBI)

Details for MMP0583 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0583

Tuberculist Genomic Region

Displaying 1 - 25 of 25

Motifs

Motif 1: e-value: 0.094 e-value: 35

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0907

predicted archaeal transcriptional regulator (NCBI)

H2

 up-regulates 0.32

MMP0907

H2

MMP1499

conserved hypothetical archaeal protein (NCBI)

H2

 up-regulates 0.19

MMP1499

H2

MMP0033

LysR family member (NCBI)

MMP0480

conserved hypothetical protein (NCBI)
 up-regulates 0.18

MMP0033

MMP0480

MMP0402

Conserved hypothetical Archael protein (NCBI)

MMP0629

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.12

MMP0402

MMP0629

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016765 transferase activity, transferring alkyl... 5 0.08 2 0.0022

Comments

Log in to post comments