Methanococcus maripaludis S2 Module 84 Residual: 0.11

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Summary

Residual: 0.11 Score: -24.5681 version: mmp_cmonkey_11_Oct_11

Members

MMP1160 conserved hypothetical protein (NCBI)

Details for MMP1160 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006118, GO:0046872, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1160

Tuberculist Genomic Region

MMP1156 conserved hypothetical protein (NCBI)

Details for MMP1156 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1156

Tuberculist Genomic Region

MMP0913 conserved hypothetical archaeal protein (NCBI)

Details for MMP0913 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0913

Tuberculist Genomic Region

MMP1157 Desulfoferrodoxin, ferrous iron-binding site (NCBI)

Details for MMP1157 - Desulfoferrodoxin, ferrous iron-binding site (NCBI)

GO Terms: GO:0006118, GO:0005506, GO:0050605

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1157

Tuberculist Genomic Region

MMP0914 conserved hypothetical archaeal protein (NCBI)

Details for MMP0914 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0914

Tuberculist Genomic Region

MMP1158 conserved hypothetical protein (NCBI)

Details for MMP1158 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1158

Tuberculist Genomic Region

MMP1154 heterosulfide reductase, subunit C1 (NCBI)

Details for MMP1154 - heterosulfide reductase, subunit C1 (NCBI)

GO Terms: GO:0006118, GO:0051912, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1154

Tuberculist Genomic Region

MMP1159 Ferritin (NCBI)

Details for MMP1159 - Ferritin (NCBI)

GO Terms: GO:0006826, GO:0006879, GO:0008199, GO:0016491, GO:0004322, GO:0004323

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1159

Tuberculist Genomic Region

MMP1155 heterosulfide reductase, subunit B1 (NCBI)

Details for MMP1155 - heterosulfide reductase, subunit B1 (NCBI)

GO Terms: GO:0051912

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1155

Tuberculist Genomic Region

MMP1161 Conserved hypothetical Archael protein (NCBI)

Details for MMP1161 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1161

Tuberculist Genomic Region

Displaying 1 - 10 of 10

Motifs

Motif 1:

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP1376

conserved hypothetical protein (NCBI)
 up-regulates 0.32

MMP0168

MMP1376

MMP0097

Transcriptional regulator protein, Helix-turn-helix motif (NCBI)

MMP1052

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.30

MMP0097

MMP1052

H2

 down-regulates -0.28

H2

MMP0217

Transcriptional repressor related protein (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 down-regulates -0.25

MMP0217

MMP1646

MMP0086

LuxR family member (NCBI)
 up-regulates 0.13

MMP0086

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006873 cellular ion homeostasis 3 0.02 1 0.0160
BP GO:0048878 chemical homeostasis 3 0.02 1 0.0160
BP GO:0050801 ion homeostasis 3 0.02 1 0.0160
BP GO:0055082 cellular chemical homeostasis 3 0.02 1 0.0160
BP GO:0098771 inorganic ion homeostasis 3 0.02 1 0.0160
BP GO:0019725 cellular homeostasis 7 0.04 1 0.0360
BP GO:0042592 homeostatic process 7 0.04 1 0.0360
BP GO:0065008 regulation of biological quality 7 0.04 1 0.0360
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005506 iron ion binding 4 0.03 2 0.0002
MF GO:0046914 transition metal ion binding 9 0.06 2 0.0012
MF GO:0046872 metal ion binding 24 0.16 2 0.0087
MF GO:0043169 cation binding 26 0.17 2 0.0102
MF GO:0016209 antioxidant activity 3 0.02 1 0.0193
MF GO:0016667 oxidoreductase activity, acting on a sul... 3 0.02 1 0.0193
MF GO:0016684 oxidoreductase activity, acting on perox... 3 0.02 1 0.0193

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