Methanococcus maripaludis S2 Module 90 Residual: 0.45

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Summary

Residual: 0.45 Score: -12.5954 version: mmp_cmonkey_11_Oct_11

Members

MMP0434 conserved hypothetical protein (NCBI)

Details for MMP0434 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0434

Tuberculist Genomic Region

MMP0622 ADP-ribosylglycohydrolase (draG) homolog (NCBI)

Details for MMP0622 - ADP-ribosylglycohydrolase (draG) homolog (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0622

Tuberculist Genomic Region

MMP0728 excinuclease ABC subunit C (NCBI)

Details for MMP0728 - excinuclease ABC subunit C (NCBI)

GO Terms: GO:0006289, GO:0005737, GO:0009380, GO:0003677, GO:0009381

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0728

Tuberculist Genomic Region

MMP0658 MoaA/nifB/pqqE family (NCBI)

Details for MMP0658 - MoaA/nifB/pqqE family (NCBI)

GO Terms: GO:0051536, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0658

Tuberculist Genomic Region

MMP1100 putative transricptional regulator (NCBI)

Details for MMP1100 - putative transricptional regulator (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1100

Tuberculist Genomic Region

MMP0725 putative integral membrane protein (NCBI)

Details for MMP0725 - putative integral membrane protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0725

Tuberculist Genomic Region

MMP1165 Haloacid dehalogenase/epoxide hydrolase:ATPase, E1-E2 type:Heavy metal transport/detoxification protein (NCBI)

Details for MMP1165 - Haloacid dehalogenase/epoxide hydrolase:ATPase, E1-E2 type:Heavy metal transport/detoxification protein (NCBI)

GO Terms: GO:0006825, GO:0008152, GO:0016021, GO:0005524, GO:0046872, GO:0046873, GO:0004008

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1165

Tuberculist Genomic Region

MMP0729 excinuclease ABC subunit A (NCBI)

Details for MMP0729 - excinuclease ABC subunit A (NCBI)

GO Terms: GO:0006289, GO:0009380, GO:0005524, GO:0009381, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0729

Tuberculist Genomic Region

MMP0277 TraB family (NCBI)

Details for MMP0277 - TraB family (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0277

Tuberculist Genomic Region

MMP0735 N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, D12 class (NCBI)

Details for MMP0735 - N-6 Adenine-specific DNA methylase:N6 adenine-specific DNA methyltransferase, D12 class (NCBI)

GO Terms: GO:0006306, GO:0003677, GO:0009007, GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0735

Tuberculist Genomic Region

MMP0278 Conserved hypothetical protein with 2 CBS domains (NCBI)

Details for MMP0278 - Conserved hypothetical protein with 2 CBS domains (NCBI)

GO Terms: GO:0008152, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0278

Tuberculist Genomic Region

MMP0791 Transcriptional regulator, TetR Family Member (NCBI)

Details for MMP0791 - Transcriptional regulator, TetR Family Member (NCBI)

GO Terms: GO:0006355, GO:0016481, GO:0003700, GO:0016566

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0791

Tuberculist Genomic Region

MMP0279 beta-ribofuranosylaminobenzene 5'-phosphate synthase (NCBI)

Details for MMP0279 - beta-ribofuranosylaminobenzene 5'-phosphate synthase (NCBI)

GO Terms: GO:0016310, GO:0005524, GO:0016301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0279

Tuberculist Genomic Region

MMP1166 related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

Details for MMP1166 - related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1166

Tuberculist Genomic Region

MMP0280 Phosphoribosyl-AMP cyclohydrolase (NCBI)

Details for MMP0280 - Phosphoribosyl-AMP cyclohydrolase (NCBI)

GO Terms: GO:0000105, GO:0004635

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0280

Tuberculist Genomic Region

MMP1167 flavoprotein related protein (NCBI)

Details for MMP1167 - flavoprotein related protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1167

Tuberculist Genomic Region

MMP0295 Homoserine kinase (NCBI)

Details for MMP0295 - Homoserine kinase (NCBI)

GO Terms: GO:0006566, GO:0016310, GO:0004413, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0295

Tuberculist Genomic Region

MMP1224 ABC-type amino acid transport/signal transduction systems periplasmic component-related (NCBI)

Details for MMP1224 - ABC-type amino acid transport/signal transduction systems periplasmic component-related (NCBI)

GO Terms: GO:0006810, GO:0030288, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1224

Tuberculist Genomic Region

MMP0302 hypothetical protein (NCBI)

Details for MMP0302 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0302

Tuberculist Genomic Region

MMP0996 hypothetical protein (NCBI)

Details for MMP0996 - hypothetical protein (NCBI)

GO Terms: GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0996

Tuberculist Genomic Region

MMP0321 conserved hypothetical archaeal protein (NCBI)

Details for MMP0321 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0010181

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0321

Tuberculist Genomic Region

MMP1164 heavy-metal transport ATPase related protein (NCBI)

Details for MMP1164 - heavy-metal transport ATPase related protein (NCBI)

GO Terms: GO:0030001, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1164

Tuberculist Genomic Region

MMP0344 conserved hypothetical archaeal protein (NCBI)

Details for MMP0344 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0344

Tuberculist Genomic Region

MMP1553 Nitroreductase family (NCBI)

Details for MMP1553 - Nitroreductase family (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1553

Tuberculist Genomic Region

MMP0476 conserved hypothetical protein (NCBI)

Details for MMP0476 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0476

Tuberculist Genomic Region

MMP1633 conserved hypothetical archaeal protein (NCBI)

Details for MMP1633 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1633

Tuberculist Genomic Region

MMP0477 hypothetical protein (NCBI)

Details for MMP0477 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0477

Tuberculist Genomic Region

MMP0997 Blue (type 1) copper domain (NCBI)

Details for MMP0997 - Blue (type 1) copper domain (NCBI)

GO Terms: GO:0006118, GO:0005507, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0997

Tuberculist Genomic Region

MMP0533 Conserved hypothetical Archael protein (NCBI)

Details for MMP0533 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0533

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 3.5 e-value: 340

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0742

conserved hypothetical protein (NCBI)
 up-regulates 0.39

MMP0742

H2

 down-regulates -0.23

H2

MMP1137

Lrp-Like Transcriptional regulatory proteins, AsnC family (NCBI)

MMP1376

conserved hypothetical protein (NCBI)
 up-regulates 0.18

MMP1137

MMP1376

MMP0217

Transcriptional repressor related protein (NCBI)

H2

 down-regulates -0.11

MMP0217

H2

GO Enrichment

Category:
Annotated

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