Methanococcus maripaludis S2 Module 94 Residual: 0.25

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Summary

Residual: 0.25 Score: -24.3824 version: mmp_cmonkey_11_Oct_11

Members

MMP0117 conserved hypothetical protein (NCBI)

Details for MMP0117 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0117

Tuberculist Genomic Region

MMP1145 Septum formation inhibitor-activating ATPase (NCBI)

Details for MMP1145 - Septum formation inhibitor-activating ATPase (NCBI)

GO Terms: GO:0009236, GO:0006118, GO:0042242, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1145

Tuberculist Genomic Region

MMP0327 Thymidine phosphorylase (NCBI)

Details for MMP0327 - Thymidine phosphorylase (NCBI)

GO Terms: GO:0006206, GO:0009032

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0327

Tuberculist Genomic Region

MMP1372 Phosphoglucomutase/phosphomannomutase (NCBI)

Details for MMP1372 - Phosphoglucomutase/phosphomannomutase (NCBI)

GO Terms: GO:0005975, GO:0004615

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1372

Tuberculist Genomic Region

MMP0431 Rhodopsin-like GPCR superfamily:Beta-lactamase-like (NCBI)

Details for MMP0431 - Rhodopsin-like GPCR superfamily:Beta-lactamase-like (NCBI)

GO Terms: GO:0007186, GO:0016021, GO:0016787, GO:0001584

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0431

Tuberculist Genomic Region

MMP1548 Fe-S type hydro-lyases tartrate/fumarate beta region (NCBI)

Details for MMP1548 - Fe-S type hydro-lyases tartrate/fumarate beta region (NCBI)

GO Terms: GO:0004333

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1548

Tuberculist Genomic Region

MMP0432 conserved hypothetical protein (NCBI)

Details for MMP0432 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0432

Tuberculist Genomic Region

MMP1549 AP endonuclease, family 2 (NCBI)

Details for MMP1549 - AP endonuclease, family 2 (NCBI)

GO Terms: GO:0006281, GO:0005622, GO:0003677, GO:0004519

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1549

Tuberculist Genomic Region

MMP0433 putative flavodoxin (NCBI)

Details for MMP0433 - putative flavodoxin (NCBI)

GO Terms: GO:0010181, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0433

Tuberculist Genomic Region

MMP0276 Conserved hypothetical protein (NCBI)

Details for MMP0276 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0276

Tuberculist Genomic Region

MMP0548 Imidazoleglycerol-phosphate dehydratase (NCBI)

Details for MMP0548 - Imidazoleglycerol-phosphate dehydratase (NCBI)

GO Terms: GO:0000105, GO:0004424

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0548

Tuberculist Genomic Region

MMP0312 conserved hypothetical archaeal protein (NCBI)

Details for MMP0312 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0312

Tuberculist Genomic Region

MMP0549 conserved hypothetical protein (NCBI)

Details for MMP0549 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0549

Tuberculist Genomic Region

MMP0336 Archaeal Holliday junction resolvase (NCBI)

Details for MMP0336 - Archaeal Holliday junction resolvase (NCBI)

GO Terms: GO:0003677, GO:0004518

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0336

Tuberculist Genomic Region

MMP0660 Adenine phosphoribosyltransferase (NCBI)

Details for MMP0660 - Adenine phosphoribosyltransferase (NCBI)

GO Terms: GO:0009116, GO:0006168, GO:0003999

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0660

Tuberculist Genomic Region

MMP0337 conserved hypothetical protein (NCBI)

Details for MMP0337 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0337

Tuberculist Genomic Region

MMP0677 conserved hypothetical protein (NCBI)

Details for MMP0677 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0677

Tuberculist Genomic Region

MMP1241 conserved hypothetical protein (NCBI)

Details for MMP1241 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1241

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 0.02 e-value: 48

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP1065

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.45

MMP1065

MMP0257

TATA-binding protein (TBP) (NCBI)

MMP1447

Cro repressor family Helix-turn-helix motif containing protein (NCBI)
 up-regulates 0.26

MMP0257

MMP1447

MMP1447

Cro repressor family Helix-turn-helix motif containing protein (NCBI)
 up-regulates 0.22

MMP1447

MMP0568

transcriptional regulator related protein (NCBI)
 down-regulates -0.11

MMP0568

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006167 AMP biosynthetic process 3 0.03 1 0.0310
BP GO:0043094 cellular metabolic compound salvage 3 0.03 1 0.0310
BP GO:0046033 AMP metabolic process 3 0.03 1 0.0310
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0004518 nuclease activity 15 0.16 3 0.0003
MF GO:0016788 hydrolase activity, acting on ester bond... 19 0.20 3 0.0007
MF GO:0004519 endonuclease activity 8 0.08 2 0.0026
MF GO:0016787 hydrolase activity 62 0.64 3 0.0206
MF GO:0016888 endodeoxyribonuclease activity, producin... 3 0.03 1 0.0308
MF GO:0004520 endodeoxyribonuclease activity 4 0.04 1 0.0408
MF GO:0004536 deoxyribonuclease activity 4 0.04 1 0.0408

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