Methanococcus maripaludis S2 Module 101 Residual: 0.35

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Summary

Residual: 0.35 Score: -15.5933 version: mmp_cmonkey_11_Oct_11

Members

RNA_19 tRNA-Met (RefSeq)

Details for RNA_19 - tRNA-Met (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_19

Tuberculist Genomic Region

RNA_49 signal recognition particle 7S RNA (RefSeq)

Details for RNA_49 - signal recognition particle 7S RNA (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_49

Tuberculist Genomic Region

RNA_31 tRNA-Ala (RefSeq)

Details for RNA_31 - tRNA-Ala (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_31

Tuberculist Genomic Region

RNA_1 tRNA-Gln (RefSeq)

Details for RNA_1 - tRNA-Gln (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_1

Tuberculist Genomic Region

RNA_43 tRNA-Trp (RefSeq)

Details for RNA_43 - tRNA-Trp (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_43

Tuberculist Genomic Region

RNA_27 tRNA-Val (RefSeq)

Details for RNA_27 - tRNA-Val (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_27

Tuberculist Genomic Region

RNA_6 tRNA-Asp (RefSeq)

Details for RNA_6 - tRNA-Asp (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_6

Tuberculist Genomic Region

RNA_13 tRNA-Ser (RefSeq)

Details for RNA_13 - tRNA-Ser (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_13

Tuberculist Genomic Region

MMP0139 formate dehydrogenase beta subunit (NCBI)

Details for MMP0139 - formate dehydrogenase beta subunit (NCBI)

GO Terms: GO:0006118, GO:0009326, GO:0051536, GO:0008863, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0139

Tuberculist Genomic Region

RNA_16 tRNA-Ser (RefSeq)

Details for RNA_16 - tRNA-Ser (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_16

Tuberculist Genomic Region

MMP0254 Conserved hypothetical protein (NCBI)

Details for MMP0254 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0254

Tuberculist Genomic Region

RNA_2 tRNA-Thr (RefSeq)

Details for RNA_2 - tRNA-Thr (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_2

Tuberculist Genomic Region

MMP0459 putative (NC_001811) unknown [Methanococcus maripaludis] gb|AAC45262.1| (U47023) unknown [Methanococcus maripaludis] (NCBI)

Details for MMP0459 - putative (NC_001811) unknown [Methanococcus maripaludis] gb|AAC45262.1| (U47023) unknown [Methanococcus maripaludis] (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0459

Tuberculist Genomic Region

RNA_20 tRNA-Phe (RefSeq)

Details for RNA_20 - tRNA-Phe (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_20

Tuberculist Genomic Region

MMP0509 formylmethanofuran dehydrogenase, subunit A (NCBI)

Details for MMP0509 - formylmethanofuran dehydrogenase, subunit A (NCBI)

GO Terms: GO:0016810, GO:0018493

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0509

Tuberculist Genomic Region

RNA_22 tRNA-Met (RefSeq)

Details for RNA_22 - tRNA-Met (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_22

Tuberculist Genomic Region

MMP0512 molybdenum containing formylmethanofuran dehydrogenase, subunit B (NCBI)

Details for MMP0512 - molybdenum containing formylmethanofuran dehydrogenase, subunit B (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0512

Tuberculist Genomic Region

RNA_23 tRNA-Glu (RefSeq)

Details for RNA_23 - tRNA-Glu (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_23

Tuberculist Genomic Region

MMP1684 conserved hypothetical protein (NCBI)

Details for MMP1684 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1684

Tuberculist Genomic Region

RNA_24 tRNA-Leu (RefSeq)

Details for RNA_24 - tRNA-Leu (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_24

Tuberculist Genomic Region

RNA_14 tRNA-Arg (RefSeq)

Details for RNA_14 - tRNA-Arg (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_14

Tuberculist Genomic Region

RNA_26 tRNA-Leu (RefSeq)

Details for RNA_26 - tRNA-Leu (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_26

Tuberculist Genomic Region

RNA_45 RNA component of RNaseP (RefSeq)

Details for RNA_45 - RNA component of RNaseP (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_45

Tuberculist Genomic Region

RNA_3 tRNA-Pro (RefSeq)

Details for RNA_3 - tRNA-Pro (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_3

Tuberculist Genomic Region

RNA_46 5S ribosomal RNA (RefSeq)

Details for RNA_46 - 5S ribosomal RNA (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_46

Tuberculist Genomic Region

RNA_5 tRNA-Lys (RefSeq)

Details for RNA_5 - tRNA-Lys (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_5

Tuberculist Genomic Region

RNA_47 5S ribosomal RNA (RefSeq)

Details for RNA_47 - 5S ribosomal RNA (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_47

Tuberculist Genomic Region

RNA_7 tRNA-Lys (RefSeq)

Details for RNA_7 - tRNA-Lys (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_7

Tuberculist Genomic Region

RNA_48 5S ribosomal RNA (RefSeq)

Details for RNA_48 - 5S ribosomal RNA (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_48

Tuberculist Genomic Region

RNA_8 tRNA-Asp (RefSeq)

Details for RNA_8 - tRNA-Asp (RefSeq)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: RNA_8

Tuberculist Genomic Region

Displaying 1 - 30 of 30

Motifs

Motif 1: e-value: 0.00000000034 e-value: 130

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0018493 formylmethanofuran dehydrogenase activit... 10 0.04 2 0.0005
MF GO:0016491 oxidoreductase activity 78 0.30 3 0.0010
MF GO:0008863 formate dehydrogenase (NAD+) activity 3 0.01 1 0.0116
MF GO:0016620 oxidoreductase activity, acting on the a... 5 0.02 1 0.0193

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