Methanococcus maripaludis S2 Module 109 Residual: 0.20

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Summary

Residual: 0.20 Score: -18.9057 version: mmp_cmonkey_11_Oct_11

Members

MMP0568 transcriptional regulator related protein (NCBI)

Details for MMP0568 - transcriptional regulator related protein (NCBI)

GO Terms: GO:0006355, GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0568

Tuberculist Genomic Region

MMP0247 conserved hypothetical archaeal protein (NCBI)

Details for MMP0247 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006412, GO:0004812, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0247

Tuberculist Genomic Region

MMP0694 Beta-lactamase-like:KH domain (NCBI)

Details for MMP0694 - Beta-lactamase-like:KH domain (NCBI)

GO Terms: GO:0003723, GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0694

Tuberculist Genomic Region

MMP0248 DNA-directed RNA polymerase related protein (NCBI)

Details for MMP0248 - DNA-directed RNA polymerase related protein (NCBI)

GO Terms: GO:0006350, GO:0003677, GO:0003902, GO:0003899, GO:0003900, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0248

Tuberculist Genomic Region

MMP1114 Pentose-5-phosphate 3-epimerase (NCBI)

Details for MMP1114 - Pentose-5-phosphate 3-epimerase (NCBI)

GO Terms: GO:0005975, GO:0004750

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1114

Tuberculist Genomic Region

MMP0566 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II related protein (NCBI)

Details for MMP0566 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II related protein (NCBI)

GO Terms: GO:0008152, GO:0005783, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0566

Tuberculist Genomic Region

MMP1115 Transketolase, N terminal half (NCBI)

Details for MMP1115 - Transketolase, N terminal half (NCBI)

GO Terms: GO:0004802

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1115

Tuberculist Genomic Region

MMP0603 translation initiation factor 1A (aIF-1A) (NCBI)

Details for MMP0603 - translation initiation factor 1A (aIF-1A) (NCBI)

GO Terms: GO:0006413, GO:0003723, GO:0003743

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0603

Tuberculist Genomic Region

MMP0033 LysR family member (NCBI)

Details for MMP0033 - LysR family member (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0000166, GO:0017111, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0033

Tuberculist Genomic Region

MMP0604 Conserved Hypothetical Protein (NCBI)

Details for MMP0604 - Conserved Hypothetical Protein (NCBI)

GO Terms: GO:0006468, GO:0005524, GO:0004713, GO:0004682

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0604

Tuberculist Genomic Region

MMP0092 DNA-directed RNA polymerase subunit F (NCBI)

Details for MMP0092 - DNA-directed RNA polymerase subunit F (NCBI)

GO Terms: GO:0006350, GO:0003902, GO:0003900, GO:0003899, GO:0000166, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0092

Tuberculist Genomic Region

MMP0707 Na+/H+ exchanger (NCBI)

Details for MMP0707 - Na+/H+ exchanger (NCBI)

GO Terms: GO:0006885, GO:0016021, GO:0015299

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0707

Tuberculist Genomic Region

MMP0246 conserved hypothetical archaeal protein (NCBI)

Details for MMP0246 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0246

Tuberculist Genomic Region

MMP1361 DNA-directed RNA polymerase subunit B (NCBI)

Details for MMP1361 - DNA-directed RNA polymerase subunit B (NCBI)

GO Terms: GO:0006350, GO:0003902, GO:0003900, GO:0003677, GO:0003899, GO:0003901

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1361

Tuberculist Genomic Region

Displaying 1 - 14 of 14

Motifs

Motif 1: e-value: 220 e-value: 8700

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.48

MMP0907

MMP1646

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP0257

TATA-binding protein (TBP) (NCBI)
 down-regulates -0.45

MMP0052

MMP0257

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0022613 ribonucleoprotein complex biogenesis 3 0.03 1 0.0310
BP GO:0042254 ribosome biogenesis 3 0.03 1 0.0310
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003676 nucleic acid binding 122 1.58 6 0.0017
MF GO:0003677 DNA binding 56 0.72 4 0.0037

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