MMP1361 MMP1361 DNA-directed RNA polymerase subunit B (NCBI) | Syntrophy Portal

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Methanococcus maripaludis S2

Summary

	Locus Tag	Symbol	Synonyms	Product	Protein Synonyms	Start	End	Strand	PubMed ID
MMP1361	MMP1361	rpoB2	rpoB2, MMP1361	DNA-directed RNA polymerase subunit B (NCBI)	RpoB2 protein (EC 2.7.7.6)	1339353	1340852	+	15466049

Regulatory Modules

	Residual	Motif 1	Expression Plot
mmp-bicluster_0025	0.31
mmp-bicluster_0092	0.41
mmp-bicluster_0109	0.20
mmp-bicluster_0149	0.30

XReference

Uniprot	NCBI Gene	NCBI Protein	GI Number	MicrobesOnline	EnsemblBacteria	InterPro	EggNOG
Q6LXJ0	2762415	NP_988481.1;	45358924	533563	CAF30917	IPR015712, IPR007644, IPR007642, IPR007645	COG0085

Mutations

Line	Position	Effect	Impact	Class	Percent Frequency	Sample	Title
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_UE3_10	BX950229-MMP1361-1340302-EP_UE3_10
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_UE3_09	BX950229-MMP1361-1340302-EP_UE3_09
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	99	EP_UE3_03	BX950229-MMP1361-1340302-EP_UE3_03
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	99	UE3.152.03.M01	BX950229-MMP1361-1340302-UE3.152.03.M01
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	UE3.152.09.M01	BX950229-MMP1361-1340302-UE3.152.09.M01
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	UE3.152.10.M02	BX950229-MMP1361-1340302-UE3.152.10.M02
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	UE3.152.03.M03	BX950229-MMP1361-1340302-UE3.152.03.M03
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	98	UE3.152.09.M03	BX950229-MMP1361-1340302-UE3.152.09.M03
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	99	UE3.152.10.M01	BX950229-MMP1361-1340302-UE3.152.10.M01
UE3	1 340 302	NON_SYNONYMOUS_CODING		MISSENSE	100	UE3.152.10.M03	BX950229-MMP1361-1340302-UE3.152.10.M03

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Transposon mutants

Title	Insert	TAG Module
MMP1361

Homology

Orthologues	Paralogues

Functions

EC Description	Protein families
(2.7.7.6) DNA-directed RNA polymerase.	RNA polymerase beta chain family

Essentiality

L1.Cm.T1	L1.Cm.T2	L1.cN.T1	L1.cN.T2	L1.T0	L2.Cm.T1	L2.Cm.T2	L2.cN.T1	L2.cN.T2	L2.T0
0	0	1	1	10	1	0	0	0	2

Product Synonyms

Product (LegacyBRC)	Product (RefSeq)

Operon

Refseq

GI Number	Accession	Blast	Conserved Domains
45358924	NP_988481.1	Run

GO Terms

GO:0006350 GO:0003902 GO:0003900 GO:0003677 GO:0003899 GO:0003901 -

String Network

Link to STRINGS	STRINGS Network
MMP1361

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