Methanococcus maripaludis S2 Module 139 Residual: 0.33

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Summary

Residual: 0.33 Score: -14.53 version: mmp_cmonkey_11_Oct_11

Members

MMP0357 UDP-N-acetylglucosamine 2-epimerase (NCBI)

Details for MMP0357 - UDP-N-acetylglucosamine 2-epimerase (NCBI)

GO Terms: GO:0006047, GO:0009103, GO:0008761

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0357

Tuberculist Genomic Region

MMP1189 Ribose 5-phosphate isomerase (NCBI)

Details for MMP1189 - Ribose 5-phosphate isomerase (NCBI)

GO Terms: GO:0009052, GO:0004751

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1189

Tuberculist Genomic Region

MMP0358 conserved hypothetical archaeal protein (NCBI)

Details for MMP0358 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0358

Tuberculist Genomic Region

MMP1499 conserved hypothetical archaeal protein (NCBI)

Details for MMP1499 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1499

Tuberculist Genomic Region

MMP0989 DNA topoisomerase VI B (NCBI)

Details for MMP0989 - DNA topoisomerase VI B (NCBI)

GO Terms: GO:0006268, GO:0006265, GO:0005694, GO:0005524, GO:0003918

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0989

Tuberculist Genomic Region

MMP1554 conserved hypothetical archaeal protein (NCBI)

Details for MMP1554 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0008152, GO:0051536, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1554

Tuberculist Genomic Region

MMP1500 Cell division protein FtsZ2 (NCBI)

Details for MMP1500 - Cell division protein FtsZ2 (NCBI)

GO Terms: GO:0051258, GO:0007017, GO:0005737, GO:0043234, GO:0005874, GO:0005525, GO:0003924

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1500

Tuberculist Genomic Region

MMP1610 conserved hypothetical protein (NCBI)

Details for MMP1610 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1610

Tuberculist Genomic Region

MMP0056 FO synthase, subunit CofH (NCBI)

Details for MMP0056 - FO synthase, subunit CofH (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0056

Tuberculist Genomic Region

MMP1648 conserved hypothetical protein (NCBI)

Details for MMP1648 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1648

Tuberculist Genomic Region

MMP0152 Cation transporter (NCBI)

Details for MMP0152 - Cation transporter (NCBI)

GO Terms: GO:0015746, GO:0016021, GO:0015137

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0152

Tuberculist Genomic Region

MMP1711 Proliferating cell nuclear antigen, PCNA (NCBI)

Details for MMP1711 - Proliferating cell nuclear antigen, PCNA (NCBI)

GO Terms: GO:0006275, GO:0006281, GO:0000074, GO:0043626, GO:0030337, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1711

Tuberculist Genomic Region

MMP0353 UDP-glucose/GDP-mannose dehydrogenase Related protein (NCBI)

Details for MMP0353 - UDP-glucose/GDP-mannose dehydrogenase Related protein (NCBI)

GO Terms: GO:0006118, GO:0016616, GO:0051287

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0353

Tuberculist Genomic Region

MMP1077 Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

Details for MMP1077 - Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

GO Terms: GO:0005975, GO:0008966, GO:0005509

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1077

Tuberculist Genomic Region

MMP0356 Glycosyl transferase, group 1 (NCBI)

Details for MMP0356 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0356

Tuberculist Genomic Region

MMP1327 DNA-directed RNA polymerase, subunit K (NCBI)

Details for MMP1327 - DNA-directed RNA polymerase, subunit K (NCBI)

GO Terms: GO:0006351, GO:0045449, GO:0030880, GO:0003902, GO:0003899, GO:0003901, GO:0003677, GO:0003900

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1327

Tuberculist Genomic Region

MMP0541 Phosphoserine phosphatase (NCBI)

Details for MMP0541 - Phosphoserine phosphatase (NCBI)

GO Terms: GO:0006564, GO:0004647

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0541

Tuberculist Genomic Region

MMP1328 Enolase (NCBI)

Details for MMP1328 - Enolase (NCBI)

GO Terms: GO:0006096, GO:0000015, GO:0004634

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1328

Tuberculist Genomic Region

MMP0579 conserved hypothetical archaeal protein (NCBI)

Details for MMP0579 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0009229, GO:0004788, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0579

Tuberculist Genomic Region

MMP1356 conserved hypothetical protein (NCBI)

Details for MMP1356 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009435, GO:0005737, GO:0003952, GO:0004808

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1356

Tuberculist Genomic Region

MMP1117 conserved hypothetical protein (NCBI)

Details for MMP1117 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1117

Tuberculist Genomic Region

Displaying 1 - 21 of 21

Motifs

Motif 1: e-value: 17 e-value: 42

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)

MMP0086

LuxR family member (NCBI)
 up-regulates 0.32

MMP0033

MMP0086

MMP0033

LysR family member (NCBI)

H2

 up-regulates 0.31

MMP0033

H2

MMP0033

LysR family member (NCBI)
 up-regulates 0.26

MMP0033

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.23

MMP0907

MMP0631

putatuve iron dependent repressor (NCBI)
 up-regulates 0.15

MMP0631

MMP0637

Transcriptional regulator, ArsR family member (NCBI)
 up-regulates 0.14

MMP0637

MMP1704

conserved hypothetical archeal protein (NCBI)
 down-regulates -0.13

MMP1704

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003677 DNA binding 56 0.72 3 0.0300
MF GO:0016857 racemase and epimerase activity, acting ... 3 0.04 1 0.0380

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