Methanococcus maripaludis S2 Module 152 Residual: 0.25

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.25 Score: -19.5272 version: mmp_cmonkey_11_Oct_11

Members

MMP0071 DNA primase, small subunit (NCBI)

Details for MMP0071 - DNA primase, small subunit (NCBI)

GO Terms: GO:0006269, GO:0003896

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0071

Tuberculist Genomic Region

MMP1029 putative predicted protein (NCBI)

Details for MMP1029 - putative predicted protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1029

Tuberculist Genomic Region

MMP0177 conserved hypothetical archaeal protein (NCBI)

Details for MMP0177 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0177

Tuberculist Genomic Region

MMP1065 conserved hypothetical archaeal protein (NCBI)

Details for MMP1065 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1065

Tuberculist Genomic Region

MMP0231 conserved hypothetical protein (NCBI)

Details for MMP0231 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0231

Tuberculist Genomic Region

MMP1233 TonB-dependent receptor protein:Formate dehydrogenase, subunit FdhD (NCBI)

Details for MMP1233 - TonB-dependent receptor protein:Formate dehydrogenase, subunit FdhD (NCBI)

GO Terms: GO:0006118, GO:0009326, GO:0008863

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1233

Tuberculist Genomic Region

MMP0269 conserved hypothetical protein (NCBI)

Details for MMP0269 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0269

Tuberculist Genomic Region

MMP1236 conserved hypothetical protein (NCBI)

Details for MMP1236 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009228

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1236

Tuberculist Genomic Region

MMP0304 conserved hypothetical archaeal protein (NCBI)

Details for MMP0304 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006281, GO:0003906

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0304

Tuberculist Genomic Region

MMP1372 Phosphoglucomutase/phosphomannomutase (NCBI)

Details for MMP1372 - Phosphoglucomutase/phosphomannomutase (NCBI)

GO Terms: GO:0005975, GO:0004615

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1372

Tuberculist Genomic Region

MMP0327 Thymidine phosphorylase (NCBI)

Details for MMP0327 - Thymidine phosphorylase (NCBI)

GO Terms: GO:0006206, GO:0009032

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0327

Tuberculist Genomic Region

MMP1477 Cobyrinic acid a,c-diamide synthase (NCBI)

Details for MMP1477 - Cobyrinic acid a,c-diamide synthase (NCBI)

GO Terms: GO:0009236, GO:0043802, GO:0042242

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1477

Tuberculist Genomic Region

MMP0585 Universal stress protein (Usp) (NCBI)

Details for MMP0585 - Universal stress protein (Usp) (NCBI)

GO Terms: GO:0006950

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0585

Tuberculist Genomic Region

MMP1487 Aldehyde dehydrogenase (NCBI)

Details for MMP1487 - Aldehyde dehydrogenase (NCBI)

GO Terms: GO:0008152, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1487

Tuberculist Genomic Region

MMP0599 Precorrin-6x reductase CbiJ/CobK (NCBI)

Details for MMP0599 - Precorrin-6x reductase CbiJ/CobK (NCBI)

GO Terms: GO:0009236, GO:0009405, GO:0016994, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0599

Tuberculist Genomic Region

MMP1549 AP endonuclease, family 2 (NCBI)

Details for MMP1549 - AP endonuclease, family 2 (NCBI)

GO Terms: GO:0006281, GO:0005622, GO:0003677, GO:0004519

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1549

Tuberculist Genomic Region

MMP0660 Adenine phosphoribosyltransferase (NCBI)

Details for MMP0660 - Adenine phosphoribosyltransferase (NCBI)

GO Terms: GO:0009116, GO:0006168, GO:0003999

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0660

Tuberculist Genomic Region

MMP1580 Dihydropteroate synthase, DHPS:Dihydropteroate synthase-related protein synthase-related protein (NCBI)

Details for MMP1580 - Dihydropteroate synthase, DHPS:Dihydropteroate synthase-related protein synthase-related protein (NCBI)

GO Terms: GO:0009396, GO:0004156

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1580

Tuberculist Genomic Region

MMP0676 Intermediate filament protein:ATP/GTP-binding site motif A (P-loop):AAA ATPase (NCBI)

Details for MMP0676 - Intermediate filament protein:ATP/GTP-binding site motif A (P-loop):AAA ATPase (NCBI)

GO Terms: GO:0017111, GO:0000166, GO:0005198, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0676

Tuberculist Genomic Region

MMP1619 Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV (NCBI)

Details for MMP1619 - Molybdenum cofactor biosynthesis protein:MoeA N-terminal region, domain I and II:MoeA C-terminal, domain IV (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1619

Tuberculist Genomic Region

Displaying 1 - 20 of 20

Motifs

Motif 1: e-value: 1.8 e-value: 530

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0097

Transcriptional regulator protein, Helix-turn-helix motif (NCBI)

MMP0527

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.45

MMP0097

MMP0527

MMP0460

Conserved Hypothetical Protein (NCBI)
 up-regulates 0.40

MMP0460

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016620 oxidoreductase activity, acting on the a... 5 0.05 2 0.0007
MF GO:0004519 endonuclease activity 8 0.07 2 0.0019
MF GO:0004518 nuclease activity 15 0.14 2 0.0070
MF GO:0016788 hydrolase activity, acting on ester bond... 19 0.17 2 0.0112
MF GO:0016903 oxidoreductase activity, acting on the a... 26 0.24 2 0.0206
MF GO:0008863 formate dehydrogenase (NAD+) activity 3 0.03 1 0.0270
MF GO:0004520 endodeoxyribonuclease activity 4 0.04 1 0.0358
MF GO:0004536 deoxyribonuclease activity 4 0.04 1 0.0358
MF GO:0003899 DNA-directed RNA polymerase activity 5 0.05 1 0.0446
MF GO:0034062 RNA polymerase activity 5 0.05 1 0.0446

Comments

Log in to post comments