Methanococcus maripaludis S2 Module 159 Residual: 0.23

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Summary

Residual: 0.23 Score: -22.52 version: mmp_cmonkey_11_Oct_11

Members

MMP0115 conserved hypothetical protein (NCBI)

Details for MMP0115 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0115

Tuberculist Genomic Region

MMP1164 heavy-metal transport ATPase related protein (NCBI)

Details for MMP1164 - heavy-metal transport ATPase related protein (NCBI)

GO Terms: GO:0030001, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1164

Tuberculist Genomic Region

MMP0190 Conserved hypothetical protein (NCBI)

Details for MMP0190 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0190

Tuberculist Genomic Region

MMP1256 conserved hypothetical protein (NCBI)

Details for MMP1256 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1256

Tuberculist Genomic Region

MMP0496 Glutamate synthase subunit-related (NCBI)

Details for MMP0496 - Glutamate synthase subunit-related (NCBI)

GO Terms: GO:0006118, GO:0006537, GO:0009342, GO:0004355, GO:0016040, GO:0046872, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0496

Tuberculist Genomic Region

MMP1293 Glycosyl transferase, group 1 (NCBI)

Details for MMP1293 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1293

Tuberculist Genomic Region

MMP0543 conserved hypothetical protein (NCBI)

Details for MMP0543 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0543

Tuberculist Genomic Region

MMP1329 ferredoxin (NCBI)

Details for MMP1329 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1329

Tuberculist Genomic Region

MMP0546 Protein of unknown function DUF51 (NCBI)

Details for MMP0546 - Protein of unknown function DUF51 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0546

Tuberculist Genomic Region

MMP1331 conserved hypothetical protein (NCBI)

Details for MMP1331 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1331

Tuberculist Genomic Region

MMP0710 cation-transporting ATPase (NCBI)

Details for MMP0710 - cation-transporting ATPase (NCBI)

GO Terms: GO:0006812, GO:0008152, GO:0016020, GO:0005524, GO:0015662

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0710

Tuberculist Genomic Region

MMP1332 NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase (NCBI)

Details for MMP1332 - NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase (NCBI)

GO Terms: GO:0006118, GO:0004148, GO:0050660

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1332

Tuberculist Genomic Region

MMP0785 Chymotrypsin serine protease, family S1 (NCBI)

Details for MMP0785 - Chymotrypsin serine protease, family S1 (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0785

Tuberculist Genomic Region

MMP1338 hypothetical protein (NCBI)

Details for MMP1338 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1338

Tuberculist Genomic Region

MMP1012 exonuclease III (NCBI)

Details for MMP1012 - exonuclease III (NCBI)

GO Terms: GO:0006281, GO:0005622, GO:0004519, GO:0003677, GO:0008853

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1012

Tuberculist Genomic Region

MMP1553 Nitroreductase family (NCBI)

Details for MMP1553 - Nitroreductase family (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1553

Tuberculist Genomic Region

Displaying 1 - 16 of 16

Motifs

Motif 1: e-value: 0.0000000012 e-value: 2400

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

H2

 down-regulates -0.42

H2

MMP0086

LuxR family member (NCBI)
 up-regulates 0.25

MMP0086

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP1100

putative transricptional regulator (NCBI)
 up-regulates 0.23

MMP0168

MMP1100

MMP0386

archaeal histone A (NCBI)

H2

 down-regulates -0.18

MMP0386

H2

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009084 glutamine family amino acid biosynthetic... 3 0.03 1 0.0310
BP GO:0043648 dicarboxylic acid metabolic process 3 0.03 1 0.0310
BP GO:0009064 glutamine family amino acid metabolic pr... 4 0.04 1 0.0410
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016491 oxidoreductase activity 78 0.71 3 0.0257
MF GO:0016667 oxidoreductase activity, acting on a sul... 3 0.03 1 0.0270
MF GO:0016651 oxidoreductase activity, acting on NAD(P... 4 0.04 1 0.0358

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