Desulfovibrio vulgaris Hildenborough Module 72 Residual: 0.31 | Syntrophy Portal

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Summary

Residual: 0.31 Score: -94.9943 version: dvh_cmonkey_11_Mar_02

Members

DVU0375 Glu/Leu/Phe/Val dehydrogenase family protein Details for DVU0375 - Glu/Leu/Phe/Val dehydrogenase family protein GO Terms: GO:0006520, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0375 Tuberculist Genomic Region	DVU0889 Phosphonopyruvate decarboxylase-related protein Details for DVU0889 - Phosphonopyruvate decarboxylase-related protein GO Terms: GO:0016829, GO:0046872 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0889 Tuberculist Genomic Region
DVU1115 Uncharacterized protein Details for DVU1115 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1115 Tuberculist Genomic Region	DVU2158 Uncharacterized protein Details for DVU2158 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2158 Tuberculist Genomic Region
DVU1733 Uncharacterized protein Details for DVU1733 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1733 Tuberculist Genomic Region	DVU2611 Uncharacterized protein Details for DVU2611 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2611 Tuberculist Genomic Region
DVU1740 Uncharacterized protein Details for DVU1740 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1740 Tuberculist Genomic Region	DVU2695 Uncharacterized protein Details for DVU2695 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2695 Tuberculist Genomic Region
DVU2740 High-affinity branched-chain amino acid ABC transporter, ATP-binding protein Details for DVU2740 - High-affinity branched-chain amino acid ABC transporter, ATP-binding protein GO Terms: GO:0005524, GO:0016887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2740 Tuberculist Genomic Region	DVUA0011 Nitrogenase molybdenum-iron protein beta chain Details for DVUA0011 - Nitrogenase molybdenum-iron protein beta chain GO Terms: GO:0018697, GO:0016612, GO:0009399, GO:0016163 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0011 Tuberculist Genomic Region
DVU0860 Uncharacterized protein Details for DVU0860 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0860 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 5.5 Motif 2:

e-value: 2700

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
[field_regulator_taxonomy_regulat_1]	up-regulates	0.11	Continuous flow
DVU0619 Sigma-54 dependent transcriptional regulator	down-regulates	-0.23	DVU0619
DVU1744 DNA-binding protein	up-regulates	0.14	DVU1744
DVU2106 Sigma-54 dependent transcriptional regulator	down-regulates	-0.10	DVU2106
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.13	DVU2114
DVU2567 Uncharacterized protein	up-regulates	0.11	DVU2567
DVU2588 DNA-binding response regulator	up-regulates	0.18	DVU2588
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.26	DVU2832
[field_regulator_taxonomy_regulat_1]	up-regulates	0.11	Formate
[field_regulator_taxonomy_regulat_1]	up-regulates	22.73	Oxygen

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016730	oxidoreductase activity, acting on iron-...	5	0.01	1	0.0117

Essentiality

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