Desulfovibrio vulgaris Hildenborough Module 80 Residual: 0.35 | Syntrophy Portal

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Summary

Residual: 0.35 Score: -81.8826 version: dvh_cmonkey_11_Mar_02

Members

DVU1053 Uncharacterized protein Details for DVU1053 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1053 Tuberculist Genomic Region	DVU1969 Uncharacterized protein Details for DVU1969 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1969 Tuberculist Genomic Region
DVU1107 Tail tape measure protein Details for DVU1107 - Tail tape measure protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1107 Tuberculist Genomic Region	DVU2604 Uncharacterized protein Details for DVU2604 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2604 Tuberculist Genomic Region
DVU1162 Uncharacterized protein Details for DVU1162 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1162 Tuberculist Genomic Region	DVU2645 Na+/H+ antiporter family protein Details for DVU2645 - Na+/H+ antiporter family protein GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2645 Tuberculist Genomic Region
DVU1504 Terminase, small subunit Details for DVU1504 - Terminase, small subunit GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1504 Tuberculist Genomic Region	DVU1417 Uncharacterized protein Details for DVU1417 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1417 Tuberculist Genomic Region
DVU1513 Uncharacterized protein Details for DVU1513 - Uncharacterized protein GO Terms: GO:0003677, GO:0004536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1513 Tuberculist Genomic Region	DVU2647 Endoribonuclease, L-PSP family Details for DVU2647 - Endoribonuclease, L-PSP family GO Terms: GO:0019239 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2647 Tuberculist Genomic Region
DVU1515 Cytosine-specific methyltransferase Details for DVU1515 - Cytosine-specific methyltransferase GO Terms: GO:0003886, GO:0003677, GO:0009307 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1515 Tuberculist Genomic Region	DVU2720 Uncharacterized protein Details for DVU2720 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2720 Tuberculist Genomic Region
DVU1516 Uncharacterized protein Details for DVU1516 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1516 Tuberculist Genomic Region	DVU3139 Bacterial extracellular solute-binding protein, family 3 Details for DVU3139 - Bacterial extracellular solute-binding protein, family 3 GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3139 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 1000 Motif 2:

e-value: 9500

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1156 Sigma-54 dependent transcriptional regulator, putative/response regulator	up-regulates	0.15	DVU1156
DVU2097 Transcriptional regulator, putative	down-regulates	-0.25	DVU2097
DVU2588 DNA-binding response regulator	up-regulates	0.15	DVU2588
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.27	DVU2832

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003886	DNA (cytosine-5-)-methyltransferase acti...	3	0.01	1	0.0070
MF	GO:0009008	DNA-methyltransferase activity	3	0.01	1	0.0070
MF	GO:0019239	deaminase activity	4	0.01	1	0.0093
MF	GO:0008757	S-adenosylmethionine-dependent methyltra...	9	0.02	1	0.0209

Essentiality

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