Methanococcus maripaludis S2 Module 16 Residual: 0.26

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Summary

Residual: 0.26 Score: -17.0149 version: mmp_cmonkey_11_Oct_11

Members

MMP0082 glutamate synthase; large subunit; archaeal subunit 3 (NCBI)

Details for MMP0082 - glutamate synthase; large subunit; archaeal subunit 3 (NCBI)

GO Terms: GO:0008152, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0082

Tuberculist Genomic Region

MMP1148 Small nuclear ribonucleoprotein (Sm protein) (NCBI)

Details for MMP1148 - Small nuclear ribonucleoprotein (Sm protein) (NCBI)

GO Terms: GO:0016071, GO:0030529

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1148

Tuberculist Genomic Region

MMP0083 conserved archaeal protein (NCBI)

Details for MMP0083 - conserved archaeal protein (NCBI)

GO Terms: GO:0006118, GO:0009055, GO:0050454, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0083

Tuberculist Genomic Region

MMP1306 conserved hypothetical protein (NCBI)

Details for MMP1306 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1306

Tuberculist Genomic Region

MMP0162 conserved hypothetical protein (NCBI)

Details for MMP0162 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0162

Tuberculist Genomic Region

MMP1308 Transaldolase (NCBI)

Details for MMP1308 - Transaldolase (NCBI)

GO Terms: GO:0005975, GO:0004801

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1308

Tuberculist Genomic Region

MMP0163 Putative arsenical pump-driving ATPase (NCBI)

Details for MMP0163 - Putative arsenical pump-driving ATPase (NCBI)

GO Terms: GO:0006820, GO:0016020, GO:0005524, GO:0042961, GO:0015446

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0163

Tuberculist Genomic Region

MMP1426 Bifunctional dCTP deaminase/dUTP diphosphatase (NCBI)

Details for MMP1426 - Bifunctional dCTP deaminase/dUTP diphosphatase (NCBI)

GO Terms: GO:0006229, GO:0008829

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1426

Tuberculist Genomic Region

MMP0597 Fibrillarin (NCBI)

Details for MMP0597 - Fibrillarin (NCBI)

GO Terms: GO:0006364, GO:0005634, GO:0003723, GO:0004682

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0597

Tuberculist Genomic Region

MMP1474 Isoleucyl-tRNA synthetase (NCBI)

Details for MMP1474 - Isoleucyl-tRNA synthetase (NCBI)

GO Terms: GO:0006428, GO:0005737, GO:0005524, GO:0004822

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1474

Tuberculist Genomic Region

MMP0639 LSU ribosomal protein L23E (NCBI)

Details for MMP0639 - LSU ribosomal protein L23E (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0639

Tuberculist Genomic Region

MMP1616 Aspartyl-tRNA synthetase (NCBI)

Details for MMP1616 - Aspartyl-tRNA synthetase (NCBI)

GO Terms: GO:0006422, GO:0005737, GO:0003676, GO:0004815, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1616

Tuberculist Genomic Region

MMP0640 SSU ribosomal protein S28E (NCBI)

Details for MMP0640 - SSU ribosomal protein S28E (NCBI)

GO Terms: GO:0006412, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0640

Tuberculist Genomic Region

MMP1640 Archaeal S-adenosylmethionine synthetase (MAT) (NCBI)

Details for MMP1640 - Archaeal S-adenosylmethionine synthetase (MAT) (NCBI)

GO Terms: GO:0006730, GO:0048269, GO:0048270, GO:0005524, GO:0004478

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1640

Tuberculist Genomic Region

MMP0641 Ribosomal protein L7AE:Ribosomal protein L7Ae/L30e/S12e/Gadd45 (NCBI)

Details for MMP0641 - Ribosomal protein L7AE:Ribosomal protein L7Ae/L30e/S12e/Gadd45 (NCBI)

GO Terms: GO:0006412, GO:0042254, GO:0005840, GO:0003735

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0641

Tuberculist Genomic Region

MMP0081 glutamate synthase; large subunit; archaeal subunit 2 (NCBI)

Details for MMP0081 - glutamate synthase; large subunit; archaeal subunit 2 (NCBI)

GO Terms: GO:0006537, GO:0006118, GO:0006207, GO:0009342, GO:0004152, GO:0051536, GO:0004355, GO:0009055, GO:0016040

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0081

Tuberculist Genomic Region

Displaying 1 - 16 of 16

Motifs

Motif 1: e-value: 25 e-value: 1300

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)
 down-regulates -0.31

MMP0052

MMP1467

conserved hypothetical protein (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.27

MMP1467

MMP1646

MMP0052

Conserved Hypothetical protein with 2 CBS domains (NCBI)

MMP0480

conserved hypothetical protein (NCBI)
 down-regulates -0.26

MMP0052

MMP0480

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 down-regulates -0.20

MMP1015

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009084 glutamine family amino acid biosynthetic... 3 0.05 1 0.0460
BP GO:0043648 dicarboxylic acid metabolic process 3 0.05 1 0.0460
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0030529 ribonucleoprotein complex 36 0.40 2 0.0390

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