Methanococcus maripaludis S2 Module 33 Residual: 0.21

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Summary

Residual: 0.21 Score: -26.1519 version: mmp_cmonkey_11_Oct_11

Members

MMP0304 conserved hypothetical archaeal protein (NCBI)

Details for MMP0304 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006281, GO:0003906

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0304

Tuberculist Genomic Region

MMP1234 conserved hypothetical membrane related protein (NCBI)

Details for MMP1234 - conserved hypothetical membrane related protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1234

Tuberculist Genomic Region

MMP0307 conserved hypothetical archaeal protein (NCBI)

Details for MMP0307 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0307

Tuberculist Genomic Region

MMP1387 Protein of unknown function DUF52 (NCBI)

Details for MMP1387 - Protein of unknown function DUF52 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1387

Tuberculist Genomic Region

MMP0311 conserved hypothetical archaeal protein (NCBI)

Details for MMP0311 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0311

Tuberculist Genomic Region

MMP1683 hypothetical protein (NCBI)

Details for MMP1683 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1683

Tuberculist Genomic Region

MMP0599 Precorrin-6x reductase CbiJ/CobK (NCBI)

Details for MMP0599 - Precorrin-6x reductase CbiJ/CobK (NCBI)

GO Terms: GO:0009236, GO:0009405, GO:0016994, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0599

Tuberculist Genomic Region

MMP0305 oxidoreductase family member subunit beta (NCBI)

Details for MMP0305 - oxidoreductase family member subunit beta (NCBI)

GO Terms: GO:0047553, GO:0030976

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0305

Tuberculist Genomic Region

MMP0691 conserved hypothetical archaeal protein (NCBI)

Details for MMP0691 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0691

Tuberculist Genomic Region

MMP0306 oxidoreductase family member subunit alpha (NCBI)

Details for MMP0306 - oxidoreductase family member subunit alpha (NCBI)

GO Terms: GO:0006118, GO:0047553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0306

Tuberculist Genomic Region

MMP0693 Aminoacyl-tRNA synthetase, class II (NCBI)

Details for MMP0693 - Aminoacyl-tRNA synthetase, class II (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0693

Tuberculist Genomic Region

MMP0600 hypothetical protein (NCBI)

Details for MMP0600 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0600

Tuberculist Genomic Region

MMP0903 hypothetical protein (NCBI)

Details for MMP0903 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0903

Tuberculist Genomic Region

MMP1059 conserved hypothetical protein (NCBI)

Details for MMP1059 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1059

Tuberculist Genomic Region

MMP1060 Cysteinyl-tRNA synthetase (NCBI)

Details for MMP1060 - Cysteinyl-tRNA synthetase (NCBI)

GO Terms: GO:0006423, GO:0005737, GO:0005524, GO:0004817

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1060

Tuberculist Genomic Region

Displaying 1 - 15 of 15

Motifs

Motif 1: e-value: 0.32 e-value: 260

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

H2

 down-regulates -0.31

H2

MMP0499

conserved hypothetical protein (NCBI)
 up-regulates 0.29

MMP0499

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 down-regulates -0.20

MMP0907

MMP1646

MMP0499

conserved hypothetical protein (NCBI)

MMP1065

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.20

MMP0499

MMP1065

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 up-regulates 0.12

MMP1015

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016491 oxidoreductase activity 78 0.81 3 0.0380
MF GO:0003824 catalytic activity 298 3.08 6 0.0410
MF GO:0004520 endodeoxyribonuclease activity 4 0.04 1 0.0410
MF GO:0004536 deoxyribonuclease activity 4 0.04 1 0.0410

Comments

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