Methanococcus maripaludis S2 Module 98 Residual: 0.32

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Summary

Residual: 0.32 Score: -17.8584 version: mmp_cmonkey_11_Oct_11

Members

MMP0924 conserved hypothetical protein (NCBI)

Details for MMP0924 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0924

Tuberculist Genomic Region

MMP0922 possible phage infection protein (NCBI)

Details for MMP0922 - possible phage infection protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0922

Tuberculist Genomic Region

MMP0925 chemotaxis protein CheW (NCBI)

Details for MMP0925 - chemotaxis protein CheW (NCBI)

GO Terms: GO:0007165, GO:0006935, GO:0005622, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0925

Tuberculist Genomic Region

MMP0923 Dihydrodipicolinate reductase (NCBI)

Details for MMP0923 - Dihydrodipicolinate reductase (NCBI)

GO Terms: GO:0009089, GO:0005737, GO:0008839

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0923

Tuberculist Genomic Region

MMP0926 chemotaxis protein CheB (NCBI)

Details for MMP0926 - chemotaxis protein CheB (NCBI)

GO Terms: GO:0006355, GO:0000160, GO:0006935, GO:0005737, GO:0000156, GO:0008984

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0926

Tuberculist Genomic Region

MMP0928 chemotaxis protein CheD (NCBI)

Details for MMP0928 - chemotaxis protein CheD (NCBI)

GO Terms: GO:0050568

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0928

Tuberculist Genomic Region

MMP0930 chemotaxis protein CheR (NCBI)

Details for MMP0930 - chemotaxis protein CheR (NCBI)

GO Terms: GO:0008983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0930

Tuberculist Genomic Region

MMP0929 Methyl-accepting chemotaxis protein (MCP) (NCBI)

Details for MMP0929 - Methyl-accepting chemotaxis protein (MCP) (NCBI)

GO Terms: GO:0016192, GO:0007165, GO:0006935, GO:0016020, GO:0005515, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0929

Tuberculist Genomic Region

MMP1230 DNA polymerase, beta-like region (NCBI)

Details for MMP1230 - DNA polymerase, beta-like region (NCBI)

GO Terms: GO:0016779

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1230

Tuberculist Genomic Region

MMP0931 probable chemotaxis-related protein (NCBI)

Details for MMP0931 - probable chemotaxis-related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0931

Tuberculist Genomic Region

MMP1231 putative HAD family hydrolase, a fragment (NCBI)

Details for MMP1231 - putative HAD family hydrolase, a fragment (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1231

Tuberculist Genomic Region

MMP0932 probable chemotaxis-related protein (NCBI)

Details for MMP0932 - probable chemotaxis-related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0932

Tuberculist Genomic Region

MMP1675 flagella accessory protein I (NCBI)

Details for MMP1675 - flagella accessory protein I (NCBI)

GO Terms: GO:0006810, GO:0005622, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1675

Tuberculist Genomic Region

MMP0933 chemotaxis protein CheY (NCBI)

Details for MMP0933 - chemotaxis protein CheY (NCBI)

GO Terms: GO:0000160, GO:0006355, GO:0000156

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0933

Tuberculist Genomic Region

MMP0050 riboflavin synthase, beta subunit (6,7-dimethyl-8-ribityllumazine synthase) (NCBI)

Details for MMP0050 - riboflavin synthase, beta subunit (6,7-dimethyl-8-ribityllumazine synthase) (NCBI)

GO Terms: GO:0009231, GO:0009349, GO:0004746

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0050

Tuberculist Genomic Region

MMP0945 glyceraldehyde-3-phosphate ferredoxin oxidoreductase (NCBI)

Details for MMP0945 - glyceraldehyde-3-phosphate ferredoxin oxidoreductase (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0043797, GO:0033726

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0945

Tuberculist Genomic Region

MMP0051 Phosphoribosyl-ATP pyrophosphatase (NCBI)

Details for MMP0051 - Phosphoribosyl-ATP pyrophosphatase (NCBI)

GO Terms: GO:0000105, GO:0004636

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0051

Tuberculist Genomic Region

MMP1674 flagella accessory protein H (NCBI)

Details for MMP1674 - flagella accessory protein H (NCBI)

GO Terms: GO:0017111, GO:0000166

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1674

Tuberculist Genomic Region

MMP0342 Conserved hypothetical protein (NCBI)

Details for MMP0342 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0019861

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0342

Tuberculist Genomic Region

MMP1676 flagella accessory protein J (NCBI)

Details for MMP1676 - flagella accessory protein J (NCBI)

GO Terms: GO:0009306, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1676

Tuberculist Genomic Region

MMP0413 Conserved hypothetical protein (NCBI)

Details for MMP0413 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0006935, GO:0007165, GO:0016020, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0413

Tuberculist Genomic Region

MMP0927 Chemotaxis protein CheA (NCBI)

Details for MMP0927 - Chemotaxis protein CheA (NCBI)

GO Terms: GO:0018106, GO:0000160, GO:0006935, GO:0006928, GO:0005737, GO:0000155, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0927

Tuberculist Genomic Region

MMP0487 Hypothetical protein (NCBI)

Details for MMP0487 - Hypothetical protein (NCBI)

GO Terms: GO:0016192, GO:0006935, GO:0007165, GO:0016020, GO:0004871, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0487

Tuberculist Genomic Region

MMP1719 conserved hypothetical protein (NCBI)

Details for MMP1719 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1719

Tuberculist Genomic Region

Displaying 1 - 24 of 24

Motifs

Motif 1: e-value: 0.000024 e-value: 3300

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0257

TATA-binding protein (TBP) (NCBI)

MMP1499

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.35

MMP0257

MMP1499

MMP0257

TATA-binding protein (TBP) (NCBI)

MMP1210

 up-regulates 0.28

MMP0257

MMP1210

MMP0791

Transcriptional regulator, TetR Family Member (NCBI)
 down-regulates -0.25

MMP0791

MMP0480

conserved hypothetical protein (NCBI)

MMP1467

conserved hypothetical protein (NCBI)
 up-regulates 0.23

MMP0480

MMP1467

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0008757 S-adenosylmethionine-dependent methyltra... 6 0.08 2 0.0022
MF GO:0008168 methyltransferase activity 18 0.23 2 0.0206
MF GO:0016741 transferase activity, transferring one-c... 19 0.25 2 0.0229
MF GO:0016628 oxidoreductase activity, acting on the C... 3 0.04 1 0.0384
MF GO:0003824 catalytic activity 298 3.86 7 0.0437

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