Methanococcus maripaludis S2 Module 107 Residual: 0.43

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Summary

Residual: 0.43 Score: -13.3796 version: mmp_cmonkey_11_Oct_11

Members

MMP0106 conserved hypothetical protein (NCBI)

Details for MMP0106 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0106

Tuberculist Genomic Region

MMP1465 conserved hypothetical protein (NCBI)

Details for MMP1465 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1465

Tuberculist Genomic Region

MMP0917 Diaminopimelate epimerase (NCBI)

Details for MMP0917 - Diaminopimelate epimerase (NCBI)

GO Terms: GO:0009089, GO:0008837

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0917

Tuberculist Genomic Region

MMP1466 conserved hypothetical protein (NCBI)

Details for MMP1466 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1466

Tuberculist Genomic Region

MMP0935 conserved hypothetical protein (NCBI)

Details for MMP0935 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0935

Tuberculist Genomic Region

MMP0014 conserved hypothetical protein (NCBI)

Details for MMP0014 - conserved hypothetical protein (NCBI)

GO Terms: GO:0031119, GO:0003723, GO:0004730, GO:0016439

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0014

Tuberculist Genomic Region

MMP1038 A1A0 ATPase, subunit H (NCBI)

Details for MMP1038 - A1A0 ATPase, subunit H (NCBI)

GO Terms: GO:0045259, GO:0003936, GO:0046933, GO:0046961

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1038

Tuberculist Genomic Region

MMP0015 conserved hypothetical protein (NCBI)

Details for MMP0015 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0015

Tuberculist Genomic Region

MMP1039 A1A0 ATPase, subunit I (NCBI)

Details for MMP1039 - A1A0 ATPase, subunit I (NCBI)

GO Terms: GO:0015992, GO:0045259, GO:0003936, GO:0046961, GO:0046933

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1039

Tuberculist Genomic Region

MMP0098 ferredoxin (NCBI)

Details for MMP0098 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0009055, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0098

Tuberculist Genomic Region

MMP1040 A1A0 ATPase, subunit K (NCBI)

Details for MMP1040 - A1A0 ATPase, subunit K (NCBI)

GO Terms: GO:0015986, GO:0016021, GO:0045259, GO:0003936, GO:0046933, GO:0046961

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1040

Tuberculist Genomic Region

MMP0104 polyferredoxin (NCBI)

Details for MMP0104 - polyferredoxin (NCBI)

GO Terms: GO:0006118, GO:0009055, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0104

Tuberculist Genomic Region

MMP1041 A1A0 ATPase, subunit IE (NCBI)

Details for MMP1041 - A1A0 ATPase, subunit IE (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0003936, GO:0046961, GO:0046933

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1041

Tuberculist Genomic Region

MMP0105 conserved hypothetical protein (NCBI)

Details for MMP0105 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0105

Tuberculist Genomic Region

MMP1042 A1A0 ATPase, subunit C (NCBI)

Details for MMP1042 - A1A0 ATPase, subunit C (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0003936, GO:0046933, GO:0046961

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1042

Tuberculist Genomic Region

MMP0212 glycyl-tRNA synthetase (NCBI)

Details for MMP0212 - glycyl-tRNA synthetase (NCBI)

GO Terms: GO:0006426, GO:0009345, GO:0004820, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0212

Tuberculist Genomic Region

MMP1043 A1A0 ATPase, subunit F (NCBI)

Details for MMP1043 - A1A0 ATPase, subunit F (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0003936, GO:0046933, GO:0046961

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1043

Tuberculist Genomic Region

MMP0637 Transcriptional regulator, ArsR family member (NCBI)

Details for MMP0637 - Transcriptional regulator, ArsR family member (NCBI)

GO Terms: GO:0006355, GO:0016481, GO:0005622, GO:0003700, GO:0016566

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0637

Tuberculist Genomic Region

MMP1044 A1A0 ATPase, subunit A (NCBI)

Details for MMP1044 - A1A0 ATPase, subunit A (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0016021, GO:0003936, GO:0005524, GO:0046933, GO:0046961

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1044

Tuberculist Genomic Region

MMP0873 TPR repeat (NCBI)

Details for MMP0873 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0873

Tuberculist Genomic Region

MMP1045 A1A0 ATPase, subunit B (NCBI)

Details for MMP1045 - A1A0 ATPase, subunit B (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0005524, GO:0046961, GO:0003936, GO:0046933

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1045

Tuberculist Genomic Region

MMP0936 shikimate 5-dehydrogenase (NCBI)

Details for MMP0936 - shikimate 5-dehydrogenase (NCBI)

GO Terms: GO:0005737, GO:0050661, GO:0004764

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0936

Tuberculist Genomic Region

MMP1046 A1A0 ATPase, subunit D (NCBI)

Details for MMP1046 - A1A0 ATPase, subunit D (NCBI)

GO Terms: GO:0015986, GO:0045259, GO:0003936, GO:0046961, GO:0046933

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1046

Tuberculist Genomic Region

MMP1190 Peptidylprolyl isomerase, FKBP-type (NCBI)

Details for MMP1190 - Peptidylprolyl isomerase, FKBP-type (NCBI)

GO Terms: GO:0006457, GO:0030051, GO:0042027, GO:0003755, GO:0004600

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1190

Tuberculist Genomic Region

MMP1047 conserved hypothetical protein (NCBI)

Details for MMP1047 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1047

Tuberculist Genomic Region

MMP1219 putative dinG ATP-dependent helicase (NCBI)

Details for MMP1219 - putative dinG ATP-dependent helicase (NCBI)

GO Terms: GO:0006139, GO:0005634, GO:0005524, GO:0003676, GO:0004003

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1219

Tuberculist Genomic Region

MMP1337 hydrogenase maturation protease, related (NCBI)

Details for MMP1337 - hydrogenase maturation protease, related (NCBI)

GO Terms: GO:0006464, GO:0008047, GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1337

Tuberculist Genomic Region

MMP1429 Transcription factor TFIIS:DNA-directed RNA polymerase, M/15 kDa subunit (NCBI)

Details for MMP1429 - Transcription factor TFIIS:DNA-directed RNA polymerase, M/15 kDa subunit (NCBI)

GO Terms: GO:0045449, GO:0003700, GO:0003900, GO:0008270, GO:0003901, GO:0003899, GO:0003902

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1429

Tuberculist Genomic Region

MMP1464 conserved hypothetical protein (NCBI)

Details for MMP1464 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1464

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 0.1 e-value: 240

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 up-regulates 0.18

MMP0168

MMP0907

MMP0460

Conserved Hypothetical Protein (NCBI)

MMP1100

putative transricptional regulator (NCBI)
 down-regulates -0.12

MMP0460

MMP1100

MMP1100

putative transricptional regulator (NCBI)

MMP1442

ArsR family transcriptional regulator (NCBI)
 down-regulates -0.11

MMP1100

MMP1442

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006811 ion transport 3 0.05 2 0.0005
BP GO:0044765 single-organism transport 3 0.05 2 0.0005
BP GO:1902578 single-organism localization 3 0.05 2 0.0005
BP GO:0006810 transport 6 0.09 2 0.0024
BP GO:0051234 establishment of localization 6 0.09 2 0.0024
BP GO:0051179 localization 8 0.12 2 0.0045
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005524 ATP binding 147 3.80 8 0.0230
MF GO:0030554 adenyl nucleotide binding 149 3.86 8 0.0250
MF GO:0032559 adenyl ribonucleotide binding 149 3.86 8 0.0250
MF GO:0000166 nucleotide binding 200 5.17 9 0.0480
MF GO:1901265 nucleoside phosphate binding 200 5.17 9 0.0480

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