Methanococcus maripaludis S2 Module 108 Residual: 0.32

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Summary

Residual: 0.32 Score: -14.7641 version: mmp_cmonkey_11_Oct_11

Members

MMP0029 conserved hypothetical archeal protein (NCBI)

Details for MMP0029 - conserved hypothetical archeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0029

Tuberculist Genomic Region

MMP0042 conserved hypothetical protein (NCBI)

Details for MMP0042 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006364, GO:0005732, GO:0019843

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0042

Tuberculist Genomic Region

MMP0194 conserved hypothetical protein (NCBI)

Details for MMP0194 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016491, GO:0046914

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0194

Tuberculist Genomic Region

MMP0634 conserved hypothetical protein (NCBI)

Details for MMP0634 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0634

Tuberculist Genomic Region

MMP0335 conserved hypothetical protein (NCBI)

Details for MMP0335 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0335

Tuberculist Genomic Region

MMP0635 ABC transporter:ATPase subunit (NCBI)

Details for MMP0635 - ABC transporter:ATPase subunit (NCBI)

GO Terms: GO:0003924, GO:0005524, GO:0005525, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0635

Tuberculist Genomic Region

MMP0542 Hypothetical protein (NCBI)

Details for MMP0542 - Hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0542

Tuberculist Genomic Region

MMP0711 magnesium, nickel and cobalt transport protein (NCBI)

Details for MMP0711 - magnesium, nickel and cobalt transport protein (NCBI)

GO Terms: GO:0006824, GO:0015693, GO:0016020, GO:0015087, GO:0015095

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0711

Tuberculist Genomic Region

MMP0628 probable Molybdenum-pterin binding protein (NCBI)

Details for MMP0628 - probable Molybdenum-pterin binding protein (NCBI)

GO Terms: GO:0006810, GO:0043190, GO:0005524, GO:0015412, GO:0030151

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0628

Tuberculist Genomic Region

MMP0964 hypothetical protein (NCBI)

Details for MMP0964 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0964

Tuberculist Genomic Region

MMP0988 RNA methyltransferase related protein (NCBI)

Details for MMP0988 - RNA methyltransferase related protein (NCBI)

GO Terms: GO:0006479, GO:0005737, GO:0008276

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0988

Tuberculist Genomic Region

MMP1015 Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)

Details for MMP1015 - Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)

GO Terms: GO:0005622, GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1015

Tuberculist Genomic Region

MMP1385 coenzyme F420-reducing hydrogenase subunit beta (NCBI)

Details for MMP1385 - coenzyme F420-reducing hydrogenase subunit beta (NCBI)

GO Terms: GO:0050454

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1385

Tuberculist Genomic Region

MMP1162 Flavodoxin:Beta-lactamase-like (NCBI)

Details for MMP1162 - Flavodoxin:Beta-lactamase-like (NCBI)

GO Terms: GO:0010181, GO:0016491, GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1162

Tuberculist Genomic Region

MMP1486 putative mechanosensitive ion channel (NCBI)

Details for MMP1486 - putative mechanosensitive ion channel (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1486

Tuberculist Genomic Region

MMP1703 conserved hypothetical archaeal protein (NCBI)

Details for MMP1703 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1703

Tuberculist Genomic Region

MMP1660 conserved hypothetical archeal protein (NCBI)

Details for MMP1660 - conserved hypothetical archeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1660

Tuberculist Genomic Region

MMP1156 conserved hypothetical protein (NCBI)

Details for MMP1156 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1156

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 0.000000000012 e-value: 0.083

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

H2

 down-regulates -0.51

H2

MMP0168

Transcriptional regulator PadR-like family (NCBI)

MMP1100

putative transricptional regulator (NCBI)
 up-regulates 0.33

MMP0168

MMP1100

MMP1347

archaeal histone B (NCBI)
 up-regulates 0.15

MMP1347

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016209 antioxidant activity 3 0.02 1 0.0230
MF GO:0016684 oxidoreductase activity, acting on perox... 3 0.02 1 0.0230
MF GO:0046873 metal ion transmembrane transporter acti... 3 0.02 1 0.0230
MF GO:0022890 inorganic cation transmembrane transport... 6 0.05 1 0.0460
MF GO:0050454 coenzyme F420 hydrogenase activity 6 0.05 1 0.0460

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