Methanococcus maripaludis S2 Module 126 Residual: 0.41

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Summary

Residual: 0.41 Score: -14.2795 version: mmp_cmonkey_11_Oct_11

Members

MMP0219 inorganic pyrophosphatase, manganese-dependent (NCBI)

Details for MMP0219 - inorganic pyrophosphatase, manganese-dependent (NCBI)

GO Terms: GO:0005737, GO:0004427, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0219

Tuberculist Genomic Region

MMP1518 sulfate/molybdate ABC-transporter homolog, ATPase subunit (NCBI)

Details for MMP1518 - sulfate/molybdate ABC-transporter homolog, ATPase subunit (NCBI)

GO Terms: GO:0006810, GO:0043190, GO:0005524, GO:0005215, GO:0016887, GO:0016820

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1518

Tuberculist Genomic Region

MMP0333 Conserved hypothetical protein (NCBI)

Details for MMP0333 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0333

Tuberculist Genomic Region

MMP1519 anion transport system permease protein (NCBI)

Details for MMP1519 - anion transport system permease protein (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1519

Tuberculist Genomic Region

MMP0383 S-layer protein (NCBI)

Details for MMP0383 - S-layer protein (NCBI)

GO Terms: GO:0005618

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0383

Tuberculist Genomic Region

MMP1520 ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:Hydrogenase accessory protein HypB (NCBI)

Details for MMP1520 - ATP/GTP-binding site motif A (P-loop):HypB/UreG, nucleotide-binding:Hydrogenase accessory protein HypB (NCBI)

GO Terms: GO:0006461, GO:0016151

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1520

Tuberculist Genomic Region

MMP0386 archaeal histone A (NCBI)

Details for MMP0386 - archaeal histone A (NCBI)

GO Terms: GO:0006352, GO:0005622, GO:0005634, GO:0043565, GO:0016986

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0386

Tuberculist Genomic Region

MMP1560 N5-methyltetrahydromethanopterin: methyltransferase, subunit E (NCBI)

Details for MMP1560 - N5-methyltetrahydromethanopterin: methyltransferase, subunit E (NCBI)

GO Terms: GO:0006814, GO:0005737, GO:0012506, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1560

Tuberculist Genomic Region

MMP0503 hypothetical protein (NCBI)

Details for MMP0503 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0503

Tuberculist Genomic Region

MMP1561 N5-methyltetrahydromethanopterin: methyltransferase, subunit D (NCBI)

Details for MMP1561 - N5-methyltetrahydromethanopterin: methyltransferase, subunit D (NCBI)

GO Terms: GO:0006814, GO:0005737, GO:0012506, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1561

Tuberculist Genomic Region

MMP0591 conserved hypothetical archaeal protein (NCBI)

Details for MMP0591 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0591

Tuberculist Genomic Region

MMP1562 N5-methyltetrahydromethanopterin: methultransferase, subunit C (NCBI)

Details for MMP1562 - N5-methyltetrahydromethanopterin: methultransferase, subunit C (NCBI)

GO Terms: GO:0015948, GO:0016021, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1562

Tuberculist Genomic Region

MMP0592 hypothetical protein (NCBI)

Details for MMP0592 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0592

Tuberculist Genomic Region

MMP1563 N5-methyltetrahydromethanopterin: methyltransferase, subunit B (NCBI)

Details for MMP1563 - N5-methyltetrahydromethanopterin: methyltransferase, subunit B (NCBI)

GO Terms: GO:0015948, GO:0016021, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1563

Tuberculist Genomic Region

MMP0593 walker type ATPase (NCBI)

Details for MMP0593 - walker type ATPase (NCBI)

GO Terms: GO:0009236, GO:0000166, GO:0017111, GO:0042242

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0593

Tuberculist Genomic Region

MMP1564 N5-methyltetrahydromethanopterin: methyltransferase, subunit A (NCBI)

Details for MMP1564 - N5-methyltetrahydromethanopterin: methyltransferase, subunit A (NCBI)

GO Terms: GO:0006814, GO:0005737, GO:0012506, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1564

Tuberculist Genomic Region

MMP0795 possible predicted protein (NCBI)

Details for MMP0795 - possible predicted protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0795

Tuberculist Genomic Region

MMP1565 N5-methyltetrahydromethanopterin: methyltransferase, subunit A and F related protein (NCBI)

Details for MMP1565 - N5-methyltetrahydromethanopterin: methyltransferase, subunit A and F related protein (NCBI)

GO Terms: GO:0015948, GO:0006814, GO:0012506, GO:0005737, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1565

Tuberculist Genomic Region

MMP0934 conserved hypothetical archaeal protein (NCBI)

Details for MMP0934 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0934

Tuberculist Genomic Region

MMP1566 N5-methyltetrahydromethanopterin: methyltransferase, subunit G (NCBI)

Details for MMP1566 - N5-methyltetrahydromethanopterin: methyltransferase, subunit G (NCBI)

GO Terms: GO:0015948, GO:0016021, GO:0030269

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1566

Tuberculist Genomic Region

MMP0935 conserved hypothetical protein (NCBI)

Details for MMP0935 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0935

Tuberculist Genomic Region

MMP1567 N5-methyltetrahydromethanopterin: methyltransferase, subunit H (NCBI)

Details for MMP1567 - N5-methyltetrahydromethanopterin: methyltransferase, subunit H (NCBI)

GO Terms: GO:0006730, GO:0009396, GO:0030269, GO:0004156

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1567

Tuberculist Genomic Region

MMP1191 N5,N10-methenyltetrahydromethanopterin cyclohydrolase (NCBI)

Details for MMP1191 - N5,N10-methenyltetrahydromethanopterin cyclohydrolase (NCBI)

GO Terms: GO:0006730, GO:0018759

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1191

Tuberculist Genomic Region

MMP1644 conserved hypothetical archaeal protein (NCBI)

Details for MMP1644 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1644

Tuberculist Genomic Region

MMP1195 putative cytoplasmic protein (NCBI)

Details for MMP1195 - putative cytoplasmic protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1195

Tuberculist Genomic Region

MMP1645 amino acid kinase related protein (NCBI)

Details for MMP1645 - amino acid kinase related protein (NCBI)

GO Terms: GO:0008652

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1645

Tuberculist Genomic Region

MMP1304 Response regulator receiver (NCBI)

Details for MMP1304 - Response regulator receiver (NCBI)

GO Terms: GO:0000160, GO:0006355, GO:0000156

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1304

Tuberculist Genomic Region

MMP1717 possible methyltransferase related protein (NCBI)

Details for MMP1717 - possible methyltransferase related protein (NCBI)

GO Terms: GO:0008152, GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1717

Tuberculist Genomic Region

MMP1305 conserved hypothetical protein (NCBI)

Details for MMP1305 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1305

Tuberculist Genomic Region

MMP1718 conserved hypothetical archeal protein (NCBI)

Details for MMP1718 - conserved hypothetical archeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1718

Tuberculist Genomic Region

Displaying 1 - 30 of 30

Motifs

Motif 1: e-value: 0.68 e-value: 160

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0637

Transcriptional regulator, ArsR family member (NCBI)

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 up-regulates 0.26

MMP0637

MMP1015

MMP0787

Transcriptional regulator, MarR Family Member (NCBI)
 down-regulates -0.16

MMP0787

MMP1275

hypothetical protein (NCBI)

MMP1376

conserved hypothetical protein (NCBI)
 up-regulates 0.13

MMP1275

MMP1376

MMP1275

hypothetical protein (NCBI)

MMP1347

archaeal histone B (NCBI)
 up-regulates 0.11

MMP1275

MMP1347

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009061 anaerobic respiration 4 0.04 1 0.0410
BP GO:0015947 methane metabolic process 4 0.04 1 0.0410
BP GO:0015948 methanogenesis 4 0.04 1 0.0410
BP GO:0015975 energy derivation by oxidation of reduce... 4 0.04 1 0.0410
BP GO:0043446 cellular alkane metabolic process 4 0.04 1 0.0410
BP GO:0043447 alkane biosynthetic process 4 0.04 1 0.0410
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0046914 transition metal ion binding 9 0.08 2 0.0025
MF GO:0046872 metal ion binding 24 0.22 2 0.0177
MF GO:0043169 cation binding 26 0.24 2 0.0206
MF GO:0043167 ion binding 220 1.99 5 0.0224

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