Organism : Bacillus subtilis | Module List :
Regulation information for BSU39910(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Module neighborhood information for BSU39910
|Gene||Common Name||Description||Module membership|
|BSU00640||spoIIE||serine phosphatase (RefSeq)||131, 141|
|BSU00650||yabS||hypothetical protein (RefSeq)||131, 141|
|BSU00660||yabT||putative serine/threonine-protein kinase (RefSeq)||137, 141|
|BSU01680||ybbF||putative sugar phosphotransferase enzyme II (RefSeq)||19, 407|
|BSU01910||skfA||sporulation killing factor A (RefSeq)||33, 141|
|BSU01920||skfB||synthesis of sporulation killing factor A (RefSeq)||33, 141|
|BSU01960||skfF||sporulation killing factor biosynthesis and export; ABC transporter (permease) (RefSeq)||33, 141|
|BSU01980||skfH||sibling killing effect ; sporulation killing factor biosynthesis and export (RefSeq)||141, 304|
|BSU02040||ybdN||hypothetical protein (RefSeq)||25, 141|
|BSU02220||ybfI||putative transcriptional regulator (AraC/XylS family, cupin family) (RefSeq)||86, 141|
|BSU07830||yfkO||NAD(P)H-flavin oxidoreductase (RefSeq)||19, 161|
|BSU12430||rapA||response regulator aspartate phosphatase (RefSeq)||12, 19|
|BSU12440||phrA||secreted inhibitor of the activity of phosphatase RapA (RefSeq)||12, 19|
|BSU15330||sigG||sporulation sigma factor SigG (RefSeq)||131, 141|
|BSU17600||xylA||xylose isomerase (RefSeq)||19, 241|
|BSU17610||xylB||xylulose kinase (RefSeq)||19, 405|
|BSU18410||ggt||membrane bound gamma-glutamyltranspeptidase (RefSeq)||12, 19|
|BSU18660||yoaM||hypothetical protein (RefSeq)||19, 150|
|BSU19690||kamA||lysine 2,3-aminomutase (RefSeq)||141, 399|
|BSU19720||yodR||putative acyloate-acetoacetate CoA-transferase (RefSeq)||141, 399|
|BSU19730||yodS||putative aminoacyloate CoA-transferase (RefSeq)||141, 399|
|BSU22540||qcrC||menaquinol:cytochrome c oxidoreductase (cytochrome cc subunit) (RefSeq)||141, 210|
|BSU26640||yrdP||putative oxidoreductase (RefSeq)||19, 161|
|BSU26650||czcD||potassium/proton-divalent cation antiporter (RefSeq)||19, 161|
|BSU29630||yttP||putative transcriptional regulator (RefSeq)||12, 141|
|BSU30960||glgD||glucose-1-phosphate adenylyltransferase (ADP-glucose pyrophosphorylase) beta subunit (RefSeq)||126, 141|
|BSU30980||glgB||glycogen branching enzyme (RefSeq)||141, 304|
|BSU33120||liaH||modulator of liaIHGFSR (yvqIHGFEC) operon expression (RefSeq)||19, 49|
|BSU33130||liaI||permease (RefSeq)||19, 115|
|BSU33140||yvqJ||putative efflux protein (RefSeq)||91, 141|
|BSU35540||tuaH||putative glycosyltransferase (RefSeq)||19, 349|
|BSU35550||tuaG||putative glycosyltransferase (RefSeq)||19, 349|
|BSU35560||tuaF||putative hydrolase involved in teichuronic acid synthesis (RefSeq)||19, 349|
|BSU35570||tuaE||putative polymerase of teichuronic acid repeating units (RefSeq)||19, 349|
|BSU35580||tuaD||UDP-glucose 6-dehydrogenase (RefSeq)||19, 349|
|BSU35590||tuaC||putative glycosyltransferase (RefSeq)||19, 349|
|BSU38090||vpr||extracellular serine protease (RefSeq)||19, 101|
|BSU38340||ywbF||putative sugar permease (RefSeq)||19, 150|
|BSU39060||citH||secondary transporter of divalent metal ions/citrate complexes (RefSeq)||141, 278|
|BSU39260||bglH||aryl-phospho-beta-d-glucosidase (RefSeq)||141, 330|
|BSU39270||bglP||phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component (RefSeq)||141, 330|
|BSU39880||yxbC||hypothetical protein (RefSeq)||12, 19|
|BSU39890||yxbB||putative S-adenosylmethionine-dependent methyltransferase (RefSeq)||19, 141|
|BSU39900||aslA||D-Aspartate ligase (RefSeq)||12, 19|
|BSU39910||yxnB||hypothetical protein (RefSeq)||19, 141|
|BSU39920||asnH||asparagine synthetase (glutamine-hydrolyzing) (RefSeq)||141, 407|
|BSU39930||yxaM||putative efflux transporter (RefSeq)||85, 141|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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