Organism : Clostridium acetobutylicum | Module List :
Predicted Zn-dependent protease with possible chaperone function (NCBI ptt file)
Functional Annotations (5)
|Zn-dependent protease with chaperone function||cog/ cog|
|metalloendopeptidase activity||go/ molecular_function|
|zinc ion binding||go/ molecular_function|
Regulation information for CAC0557(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC0557
Module neighborhood information for CAC0557
|Gene||Common Name||Description||Module membership|
|CAC0023||CAC0023||Transcriptional regulator, LysR family (NCBI ptt file)||179, 266|
|CAC0032||CAC0032||Transcriptional regulator TetR/AcrR family (NCBI ptt file)||1, 179|
|CAC0068||CAC0068||(FS) similar to ABC transporter (permease), YXDM B.subtilis ortholog (NCBI ptt file)||40, 246|
|CAC0153||CAC0153||Beta-phosphoglucomutase, putative (NCBI ptt file)||179, 302|
|CAC0180||appF||Oligopeptide ABC transporter, ATP-binding protein (NCBI ptt file)||179, 278|
|CAC0219||CAC0219||Uracyl DNA glycosilase (NCBI ptt file)||40, 160|
|CAC0350||CAC0350||Hypothetical protein (NCBI ptt file)||11, 179|
|CAC0484||CAC0484||Phosphomannomutase (NCBI ptt file)||40, 246|
|CAC0557||CAC0557||Predicted Zn-dependent protease with possible chaperone function (NCBI ptt file)||40, 179|
|CAC0611||CAC0611||Predicted membrane protein, YohK family (NCBI ptt file)||40, 198|
|CAC0612||CAC0612||Predicted membrane protein YohJ family (NCBI ptt file)||40, 198|
|CAC0618||CAC0618||Uncharacterised permease, similar to ABC transporter (permease) (NCBI ptt file)||40, 312|
|CAC0966||CAC0966||Predicted membrane protein (NCBI ptt file)||40, 302|
|CAC1038||CAC1038||Predicted metal-binding membrane protein (NCBI ptt file)||77, 179|
|CAC1077||CAC1077||Putative translation initiation inhibitor (NCBI ptt file)||102, 179|
|CAC1107||CAC1107||Hypothetical protein, CF-36 family (NCBI ptt file)||167, 179|
|CAC1248||minC||Septum site-determining protein MinC (NCBI ptt file)||167, 179|
|CAC1428||CAC1428||Hypothetical protein (NCBI ptt file)||93, 179|
|CAC1432||CAC1432||Undecaprenyl pyrophosphate synthase related enzyme (NCBI ptt file)||95, 179|
|CAC1472||CAC1472||Amino acid permease (NCBI ptt file)||40, 267|
|CAC1550||CAC1550||Methionine sulfoxide reductase C-terminal domain related protein, YPPQ ortholog (NCBI ptt file)||179, 320|
|CAC1853||CAC1853||Predicted membrane protein (NCBI ptt file)||179, 262|
|CAC2111||CAC2111||Fibronectin-binding protein (NCBI ptt file)||40, 198|
|CAC2245||CAC2245||Stress-induced protein OsmC (NCBI ptt file)||40, 130|
|CAC2278||secD||Preprotein translocase subunits SecD (NCBI ptt file)||8, 179|
|CAC2279||CAC2279||Heme biosynthesis (nirJ-2) family protein (NCBI ptt file)||8, 179|
|CAC2394||CAC2394||Transcriptional regulator, LysR family (NCBI ptt file)||40, 231|
|CAC2395||CAC2395||Predicted phosphatase, YWOA B.subtilis ortholog (NCBI ptt file)||40, 130|
|CAC2396||CAC2396||Predicted xylanase/chitin deacetylase (NCBI ptt file)||179, 253|
|CAC2491||CAC2491||Predicted acetyltransferase (NCBI ptt file)||179, 312|
|CAC2676||CAC2676||Predicted pseudouridylate synthase (NCBI ptt file)||72, 179|
|CAC2896||CAC2896||Uncharacterized protein, YPEB B.subtilis ortholog (NCBI ptt file)||59, 179|
|CAC2898||spoIIR||Stage II sporulation protein R (NCBI ptt file)||24, 179|
|CAC2971||thiI||Thiamine biosynthesis enzyme, THII (NCBI ptt file)||40, 198|
|CAC2972||nifS||Possible cysteine desulphurase from NifS family (NCBI ptt file)||40, 319|
|CAC2995||CAC2995||PTS system (Glucose-specific) component IIA (NCBI ptt file)||77, 179|
|CAC3005||add||Adenosine deaminase (NCBI ptt file)||40, 341|
|CAC3285||CAC3285||Predicted amino acid transporter (NCBI ptt file)||40, 302|
|CAC3329||CAC3329||Putative Mn transporter, NRAMP family (NCBI ptt file)||24, 40|
|CAC3444||CAC3444||Probable cation efflux pump (multidrug resistance protein) (NCBI ptt file)||40, 218|
|CAC3496||CAC3496||Predicted transcriptional regulator (NCBI ptt file)||179, 341|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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