Organism : Clostridium acetobutylicum | Module List :
Biotin synthase family enzyme (NCBI ptt file)
Functional Annotations (5)
|Biotin synthase and related enzymes||cog/ cog|
|biotin synthase activity||go/ molecular_function|
|metabolic process||go/ biological_process|
|iron-sulfur cluster binding||go/ molecular_function|
Regulation information for CAC1631(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for CAC1631
Module neighborhood information for CAC1631
|Gene||Common Name||Description||Module membership|
|CAC0080||agrC||Histidine kinase-like ATPase (NCBI ptt file)||137, 241|
|CAC0101||CAC0101||Methyl-accepting chemotaxis protein (NCBI ptt file)||241, 333|
|CAC0189||CAC0189||Similar to transcriptional regulator, GntR family (NCBI ptt file)||241, 343|
|CAC0252||CAC0252||Molybdate-binding protein (NCBI ptt file)||137, 148|
|CAC0271||CAC0271||Predicted esterase (NCBI ptt file)||49, 241|
|CAC0317||CAC0317||Sensory transduction histidine kinase (NCBI ptt file)||137, 253|
|CAC0336||CAC0336||Hypothetical protein, CF-22 family (NCBI ptt file)||137, 163|
|CAC0373||CAC0373||ABC transporter, ATP binding protein (NCBI ptt file)||171, 241|
|CAC0485||CAC0485||TRNA-processing ribonuclease BN (NCBI ptt file)||137, 258|
|CAC0703||CAC0703||Sugar ABC-transporter, ATP-ase component (NCBI ptt file)||95, 137|
|CAC0736||CAC0736||Possible glucanotransferase (putative endo alpha-1,4 polygalactosaminidase related protein) (NCBI ptt file)||28, 241|
|CAC0753||CAC0753||PolyA polymerase related protein (HD hydrolase) and P-loop ATP-ase domain (NCBI ptt file)||137, 353|
|CAC0839||potB||ABC-type spermidine/putrescine transport system, permease component I (NCBI ptt file)||137, 153|
|CAC0854||tet||Tetracycline resistance protein tetP, contain GTP-ase domain (NCBI ptt file)||241, 316|
|CAC0855||CAC0855||Predicted phosphatase (NCBI ptt file)||72, 241|
|CAC0887||adeC||Adenine deaminase (NCBI ptt file)||65, 241|
|CAC1125||CAC1125||Hypothetical protein (NCBI ptt file)||137, 165|
|CAC1194||CAC1194||Hypothetical protein (NCBI ptt file)||137, 253|
|CAC1284||prmA||SAM-dependent methyltransferase (NCBI ptt file)||47, 137|
|CAC1352||CAC1352||Membrane associated chemotaxis sensory transducer protein (MSP domain and HAMP domain) (NCBI ptt file)||137, 256|
|CAC1465||CAC1465||Transcriptional regulator, MarR/EmrR family (NCBI ptt file)||137, 313|
|CAC1496||CAC1496||Uncharacterized protein, homolog of YCGL B.subtilis (NCBI ptt file)||71, 137|
|CAC1607||CAC1607||Hypothetical protein (NCBI ptt file)||4, 137|
|CAC1631||CAC1631||Biotin synthase family enzyme (NCBI ptt file)||137, 241|
|CAC1845||motB||Flagellar motor protein MotB (NCBI ptt file)||123, 137|
|CAC2344||CAC2344||LPS biosynthesis protein , RfbU family (NCBI ptt file)||137, 159|
|CAC2350||CAC2350||Sugar transaminase, involved in dTDP-4-amino-4,6-dideoxyglucose biosynthesis (NCBI ptt file)||100, 137|
|CAC2400||CAC2400||Serine/threonine kinase related protein, inactivated (HRDL motif absent) (fragment) (NCBI ptt file)||69, 137|
|CAC2690||CAC2690||Transcriptional regulator, LysR family (NCBI ptt file)||86, 137|
|CAC2768||CAC2768||Transcriptional regulators, AcrR family (NCBI ptt file)||241, 333|
|CAC2816||CAC2816||Hypothetical protein, CF-17 family (NCBI ptt file)||241, 333|
|CAC2818||CAC2818||AraC-type DNA-binding domain-containing protein, transcriptional regulator (NCBI ptt file)||223, 241|
|CAC2874||CAC2874||UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file)||137, 315|
|CAC2893||CAC2893||Hypothetical protein (NCBI ptt file)||63, 137|
|CAC2978||gatC||Glu-tRNA amidotransferase, subunit C (NCBI ptt file)||47, 137|
|CAC3121||rplE||Ribosomal protein L5 (NCBI ptt file)||59, 241|
|CAC3238||CAC3238||Ucharacterized Fe-S oxidoreductase (NCBI ptt file)||125, 241|
|CAC3257||CAC3257||Predicted membrane protein (NCBI ptt file)||137, 333|
|CAC3276||nrdB||Ribonucleotide reductase beta subunit (NCBI ptt file)||141, 241|
|CAC3429||CAC3429||Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) (NCBI ptt file)||220, 241|
|CAC3493||CAC3493||Predicted transcriptional regulator component, YOBU B.subtilis homolog (NCBI ptt file)||137, 241|
|CAC3532||CAC3532||Hypothetical protein (NCBI ptt file)||241, 333|
|CAC3645||CAC3645||CRO repressor-like DNA-binding protein (NCBI ptt file)||120, 241|
|CAC3669||CAC3669||Transcriptional regulator, MarR/EmrR family (NCBI ptt file)||65, 137|
|CAC3733||gidA||Glucose-inhibited division protein, GIDA (NAD/FAD-utilizing enzyme) (NCBI ptt file)||120, 241|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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