Cre03.g180450.t1.2 5\'-nucleotidase and Flagellar Associated Protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre03.g180450.t1.2 chromosome_3 5\'-nucleotidase and Flagellar Associated Protein CDS 5002933 5008263 - 5 330

Phytozome

Locus Genomic View Functional Annotation
Cre03.g180450.t1.2 Cre03.g180450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FPN1 g3740.t1, Cre03.g180450.t1.1 JGI114106 30788227 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0037
motif_0037_1

motif_0037_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000069
Motif Bicluster: 
bicluster_0037
Width: 
21
Number of Sites: 
1
Consensus: 
CncCGCCActGcCnCCgCCac
motif_0037_2

motif_0037_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.034
Motif Bicluster: 
bicluster_0037
Width: 
24
Number of Sites: 
1
Consensus: 
TTGGTTTAGTgTgGGcTGGTaTnT
 0.20
bicluster_0192
motif_0192_1

motif_0192_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000058
Motif Bicluster: 
bicluster_0192
Width: 
20
Number of Sites: 
1
Consensus: 
CCgCCaCnGCCACaGCCgCC
motif_0192_2

motif_0192_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0097
Motif Bicluster: 
bicluster_0192
Width: 
24
Number of Sites: 
1
Consensus: 
cATGcAttGAgCAAAaGCCAcTTG
 0.25

GO Terms

GO:0016787 GO:0009166 -

hydrolase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

nucleotide catabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the breakdown of nucleotides, any nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the glycose moiety; may be mono-, di- or triphosphate; this definition includes cyclic-nucleotides (nucleoside cyclic phosphates).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI114106

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