Cre08.g372450.t1.2 photosystem II subunit Q-2

Chromosome Product Feature Type Transcript Start End Strand Length
Cre08.g372450.t1.2 chromosome_8 photosystem II subunit Q-2 CDS 2553650 2556775 - 3 125
Locus Genomic View Functional Annotation
Cre08.g372450.t1.2 Cre08.g372450.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g8723.t1, Cre08.g372450.t1.1 JGI153656 30773912 Search
Motif 1 Motif 2 Residual
bicluster_0028

motif_0028_1

e.value: 
0.00000028
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
ATAccagcCCAAaCtAAAcCgAAc

motif_0028_2

e.value: 
0.0000000000000067
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
cCAncagCACCagCAgcAgCagCA
0.12
bicluster_0185

motif_0185_1

e.value: 
0.00000027
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
GCGGCGGCggCagcGGCgGcg

motif_0185_2

e.value: 
0.048
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
atTGCATtGgGntCgagttacTTg
0.13
GO:0005509 GO:0015979 GO:0009523 GO:0009654 GO:0019898 -

calcium ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem II

GO Category: 
cellular_component
Details: 
A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.

oxygen evolving complex

GO Category: 
cellular_component
Details: 
A complex, composed of a cluster of manganese, calcium and chloride ions bound to extrinsic proteins, that catalyzes the splitting of water to O2 and 4 H+. In cyanobacteria there are five extrinsic proteins in OEC (PsbO, PsbP-like, PsbQ-like, PsbU and PsbV), while in plants there are only three (PsbO, PsbP and PsbQ).

extrinsic to membrane

GO Category: 
cellular_component
Details: 
Loosely bound to one surface of a membrane, but not integrated into the hydrophobic region.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI153656
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