Cre17.g726750.t1.2 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g726750.t1.2 chromosome_17 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 CDS 3674937 3678190 - 3 253

Phytozome

Locus Genomic View Functional Annotation
Cre17.g726750.t1.2 Cre17.g726750.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SHK1, SHKA1 g17572.t1, Cre17.g726750.t1.1 JGI192517 30782626 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0006
motif_0006_1

motif_0006_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000074
Motif Bicluster: 
bicluster_0006
Width: 
21
Number of Sites: 
1
Consensus: 
aGGCGGcGGcgGcgGCGGcgg
motif_0006_2

motif_0006_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
95
Motif Bicluster: 
bicluster_0006
Width: 
8
Number of Sites: 
1
Consensus: 
AAaaTGTT
 0.19
bicluster_0085
motif_0085_1

motif_0085_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
5.3e-16
Motif Bicluster: 
bicluster_0085
Width: 
23
Number of Sites: 
1
Consensus: 
AGCGGCAcCGGCAGCGGCaGCaG
motif_0085_2

motif_0085_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00046
Motif Bicluster: 
bicluster_0085
Width: 
15
Number of Sites: 
1
Consensus: 
ttAtATtATaTgcgt
 0.38

GO Terms

GO:0003849 GO:0009073 -

3-deoxy-7-phosphoheptulonate synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: D-erythrose 4-phosphate + H(2)O + phosphoenolpyruvate = 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonate + phosphate.

aromatic amino acid family biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of aromatic amino acid family, amino acids with aromatic ring (phenylalanine, tyrosine, tryptophan).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI192517

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