Organism : Campylobacter jejuni | Module List :
Regulation information for Cj0899c(Mouseover regulator name to see its description)
Motif information (de novo identified motifs for modules)
There are 4 motifs predicted.
|Motif Id||e-value||Consensus||Motif Logo|
Functional Enrichment for Cj0899c
Module neighborhood information for Cj0899c
|Gene||Common Name||Description||Module membership|
|Cj0020c||Cj0020c||cytochrome C551 peroxidase (NCBI ptt file)||137, 170|
|Cj0055c||Cj0055c||hypothetical protein Cj0055c (NCBI ptt file)||110, 149|
|Cj0105||atpA||ATP synthase F1 sector alpha subunit (NCBI ptt file)||91, 137|
|Cj0106||atpG||ATP synthase F1 sector gamma subunit (NCBI ptt file)||60, 110|
|Cj0172c||Cj0172c||hypothetical protein Cj0172c (NCBI ptt file)||61, 137|
|Cj0205||bacA||putative undecaprenol kinase (bacitracin resistance protein) (NCBI ptt file)||98, 110|
|Cj0371||Cj0371||putative flagellar motility protein (NCBI ptt file)||13, 110|
|Cj0453||thiC||thiamin biosynthesis protein ThiC (NCBI ptt file)||13, 137|
|Cj0512||purC||phosphoribosylaminoimidazole-succinocarboxamide synthase (NCBI ptt file)||111, 137|
|Cj0518||htpG||hsp90 family heat shock protein (NCBI ptt file)||111, 137|
|Cj0532||mdh||malate dehydrogenase (NCBI ptt file)||11, 110|
|Cj0545||hemC||porphobilinogen deaminase (NCBI ptt file)||48, 137|
|Cj0558c||proA||gamma-glutamyl phosphate reductase (NCBI ptt file)||110, 116|
|Cj0572||ribA||GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase (NCBI ptt file)||110, 130|
|Cj0573||Cj0573||hypothetical protein Cj0573 (NCBI ptt file)||110, 130|
|Cj0574||ilvI||acetolactate synthase large subunit (NCBI ptt file)||11, 110|
|Cj0575||ilvH||acetolactate synthase small subunit (NCBI ptt file)||13, 110|
|Cj0576||lpxD||UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (NCBI ptt file)||37, 110|
|Cj0628||Cj0628||putative lipoprotein (NCBI)||110, 130|
|Cj0662c||hslU||putative heat shock protein (NCBI ptt file)||137, 170|
|Cj0663c||hslV||putative heat shock protein (NCBI ptt file)||137, 160|
|Cj0664c||rplI||50S ribosomal protein L9 (NCBI ptt file)||130, 137|
|Cj0672||Cj0672||putative periplasmic protein (NCBI ptt file)||26, 137|
|Cj0695||ftsA||cell division protein ftsA (NCBI ptt file)||132, 137|
|Cj0701||Cj0701||putative protease (NCBI ptt file)||110, 141|
|Cj0714||rplS||50S ribosomal protein L19 (NCBI ptt file)||8, 137|
|Cj0716||Cj0716||putative phospho-2-dehydro-3-deoxyheptonate aldolase (NCBI ptt file)||98, 137|
|Cj0802||cysS||cysteinyl-tRNA synthetase (NCBI ptt file)||69, 110|
|Cj0805||Cj0805||putative zinc protease (NCBI ptt file)||110, 122|
|Cj0806||dapA||dihydrodipicolinate synthase (NCBI ptt file)||127, 137|
|Cj0807||Cj0807||putative oxidoreductase (NCBI ptt file)||111, 137|
|Cj0821||glmU||UDP-N-acetylglucosamine pyrophosphorylase (NCBI ptt file)||104, 110|
|Cj0899c||thiJ||4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein (NCBI ptt file)||110, 137|
|Cj0923c||cheR||putative MCP protein methyltransferase (NCBI ptt file)||60, 110|
|Cj0929||pepA||aminopeptidase (NCBI ptt file)||53, 137|
|Cj0994c||argF||ornithine carbamoyltransferase (NCBI ptt file)||42, 137|
|Cj0995c||hemB||delta-aminolevulinic acid dehydratase (NCBI ptt file)||111, 137|
|Cj1060c||Cj1060c||small hydrophobic protein (NCBI ptt file)||110, 160|
|Cj1075||Cj1075||hypothetical protein Cj1075 (NCBI ptt file)||137, 142|
|Cj1096c||metK||S-adenosylmethionine synthetase (NCBI ptt file)||137, 170|
|Cj1176c||Cj1176c||hypothetical protein Cj1176c (NCBI ptt file)||137, 142|
|Cj1197c||gatB||Glu-tRNAGln amidotransferase subunit B (NCBI ptt file)||64, 110|
|Cj1218c||ribA||putative riboflavin synthase alpha chain (NCBI ptt file)||110, 160|
|Cj1400c||fabI||putative enoyl-[acyl-carrier-protein] reductase [NADH] (NCBI ptt file)||94, 137|
|Cj1401c||tpiA||putative triosephosphate isomerase (NCBI ptt file)||110, 137|
|Cj1402c||pgk||phosphoglycerate kinase (NCBI ptt file)||110, 121|
|Cj1403c||gapA||glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file)||137, 142|
|Cj1441c||kfiD||putative UDP-glucose 6-dehydrogenase (NCBI ptt file)||14, 137|
|Cj1476c||Cj1476c||pyruvate-flavodoxin oxidoreductase (NCBI ptt file)||137, 170|
|Cj1518||moaE||possible molybdopterin converting factor, subunit 2 (NCBI ptt file)||133, 137|
|Cj1634c||aroC||chorismate synthase (NCBI ptt file)||63, 110|
|Cj1639||Cj1639||nifU protein homolog (NCBI ptt file)||69, 137|
|Cj1672c||eno||enolase (NCBI ptt file)||137, 160|
|Cj1673c||recA||recA protein (NCBI ptt file)||38, 110|
|Cjt01||tRNA-Leu||tRNA-Leu (NCBI)||77, 110|
Gene Page Help
If the gene is associated with a module(s), its connection to given modules along with other members of that module are shown as network by using CytoscapeWeb. In this view, each green colored circular nodes represent module member genes, purple colored diamonds represent module motifs and red triangles represent regulators. Each node is connected to module (Bicluster) via edges. This representation provides quick overview of all genes, regulators and motifs for modules. It also allows one to see shared genes/motifs/regulators among diferent modules.
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CircVisOur circular module explorer is adapted from visquick originally developed by Dick Kreisberg of Ilya Shmulevich lab at ISB for The Cancer Genome Atlas. We use simplified version of visquick to display distribution of module members and their interactions across the genome. This view provides summary of regulation information for a gene. The main components are;
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