PHATRDRAFT_12265 uncharacterized protein family upf0016 containingexpressed (COG2119)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_12265 chr_8 uncharacterized protein family upf0016 containingexpressed (COG2119) 855415 856041 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0232

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0211
 0.25

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 45.9399 2.47E-07 2 - 83 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 45.9399 2.47E-07 2 - 83 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 45.9399 2.47E-07 2 - 83 superfamily 250414
UPF0016 superfamily Uncharacterized protein family UPF0016; This family contains integral membrane proteins of unknown... - 45.9399 2.47E-07 2 - 83 superfamily 250414
COG2119 Predicted membrane protein [Function unknown] - 86.2277 6.34E-21 7 - 208 multi-dom 225030

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
18109 Not available 227895 325065 205689 Cre16.g660000.t1.2 AT4G13590.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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