PHATRDRAFT_12620 n-ethylmaleimide-sensitive factor nsf sec18p (AAA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_12620	chr_9	n-ethylmaleimide-sensitive factor nsf sec18p (AAA)	741124	742722	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0229

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0190	0.25	44000 50000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	57.9263	3.20E-10	313 - 464	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	57.9263	3.20E-10	313 - 464	superfamily	267297
AAA		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	cl18944	57.9263	3.20E-10	313 - 464	specific	99707
AAA superfamily		The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an...	-	57.9263	3.20E-10	313 - 464	superfamily	267297
AAA		ATPases associated with a variety of cellular activities; AAA - ATPases associated with a variety...	-	63.5465	5.06E-12	49 - 194	multi-dom	214640

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
12899		Not available	137701	324030	452918	Cre10.g461250.t1.1	AT4G04910.1	488608

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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