PHATRDRAFT_15627 ubiquitin-protein ligase (HECTc)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_15627 chr_20 ubiquitin-protein ligase (HECTc) 118067 119014 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0124

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0068
 0.33

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HECTc HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... cl00077 315.659 9.11E-106 1 - 313 specific 238033
HECTc superfamily HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds... - 315.659 9.11E-106 1 - 313 superfamily 260176
HECTc Domain Homologous to E6-AP Carboxyl Terminus with; E3 ubiquitin-protein ligases. Can bind to E2... - 303.386 2.63E-101 1 - 312 multi-dom 214523

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
261019 Not available 199811 295109 470202 Cre08.g364550.t1.1 Not available 535457

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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