PHATRDRAFT_22453 dass family transporter: sodium ion sulfate (ArsB_NhaD_permease superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_22453 chr_17 dass family transporter: sodium ion sulfate (ArsB_NhaD_permease superfamily) 525444 528716 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0047

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0092
 0.51

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ArsB_NhaD_permease superfamily Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate,... - 110.367 2.01E-26 398 - 586 superfamily 266565
ArsB_NhaD_permease superfamily Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate,... - 110.367 2.01E-26 398 - 586 superfamily 266565
TrkA_C superfamily TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this... - 40.6906 0.000110526 220 - 279 superfamily 251075
TrkA_C superfamily TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this... - 40.6906 0.000110526 220 - 279 superfamily 251075
TrkA_C superfamily TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this... - 40.6906 0.000110526 220 - 279 superfamily 251075
TrkA_C superfamily TrkA-C domain; This domain is often found next to the pfam02254 domain. The exact function of this... - 40.6906 0.000110526 220 - 279 superfamily 251075
CitT Di- and tricarboxylate transporters [Inorganic ion transport and metabolism] - 110.104 6.15E-26 116 - 591 multi-dom 223547

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 236472 Cre03.g160400.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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