PHATRDRAFT_25183 carbamoyl-phosphate synthetaseaspartateand dihydroorotase (PLN02527)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_25183	chr_2	carbamoyl-phosphate synthetaseaspartateand dihydroorotase (PLN02527)	168163	169272	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0148

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0119	0.39	57000 330000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
OTCace superfamily		Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine...	-	140.786	1.75E-40	178 - 330	superfamily	249663
OTCace superfamily		Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate/ornithine...	-	140.786	1.75E-40	178 - 330	superfamily	249663
OTCace_N superfamily		Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine...	-	136.145	7.19E-39	23 - 164	superfamily	251498
OTCace_N superfamily		Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine...	-	136.145	7.19E-39	23 - 164	superfamily	251498
PLN02527		aspartate carbamoyltransferase	-	496.192	4.46E-177	22 - 334	multi-dom	178142

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
34595		Not available	202219	259494	53510	Cre02.g079700.t1.2	AT3G20330.1	555428

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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