PHATRDRAFT_41894 had superfamily protein involved in n-acetyl-glucosamine catabolism-like (HAD-SF-IIA-hyp4)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_41894 chr_6 had superfamily protein involved in n-acetyl-glucosamine catabolism-like (HAD-SF-IIA-hyp4) 72058 73008 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0059

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0132
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 50.0611 4.91E-08 176 - 273 superfamily 119389
HAD_like superfamily Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-... - 50.0611 4.91E-08 176 - 273 superfamily 119389
Hydrolase_6 superfamily Haloacid dehalogenase-like hydrolase; This family is part of the HAD superfamily. - 63.6053 5.15E-13 15 - 94 superfamily 257673
Hydrolase_6 superfamily Haloacid dehalogenase-like hydrolase; This family is part of the HAD superfamily. - 63.6053 5.15E-13 15 - 94 superfamily 257673
HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459; This hypothetical equivalog is a member of the... - 119.227 1.21E-31 12 - 273 multi-dom 130526

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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