PHATRDRAFT_42688 mitochondrial protein (PPR_2)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_42688 chr_1 mitochondrial protein (PPR_2) 797521 800278 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0121

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0241
 0.23

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 50.8642 3.41E-08 456 - 505 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 40.849 8.29E-05 350 - 399 superfamily 261658
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 50.8642 3.41E-08 456 - 505 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 40.849 8.29E-05 350 - 399 superfamily 261658
PPR_2 PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... cl03252 50.8642 3.41E-08 456 - 505 specific 257477
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 40.849 8.29E-05 350 - 399 superfamily 261658
PPR_2 superfamily PPR repeat family; This repeat has no known function. It is about 35 amino acids long and is found... - 40.849 8.29E-05 350 - 399 superfamily 261658

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23415 Not available 163396 177493 53066 Cre10.g437150.t1.2 Not available 263881

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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