PHATRDRAFT_4286 bass family transporter: sodium ion bile acid (COG0385)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4286	chr_11	bass family transporter: sodium ion bile acid (COG0385)	728049	729005	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0121

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0180	0.25	1.3 45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG0385		Predicted Na+-dependent transporter [General function prediction only]	cl19217	171.647	1.58E-50	4 - 315	specific	223462
SBF superfamily		Sodium Bile acid symporter family; This family consists of Na+/bile acid co-transporters. These...	-	171.647	1.58E-50	4 - 315	superfamily	267570

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
30004		Not available	231423	257435	Not available	Cre12.g532500.t1.2	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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