PHATRDRAFT_44844 pseudouridylate synthase (RluA)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44844 chr_5 pseudouridylate synthase (RluA) 416664 417978 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0006

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PseudoU_synth_RluCD_like Pseudouridine synthase, RsuA/RluD family; This group is comprised of eukaryotic, bacterial and... cl00130 136.698 6.99E-38 220 - 424 specific 211346
PseudoU_synth superfamily Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to... - 136.698 6.99E-38 220 - 424 superfamily 260207
RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] - 150.924 5.10E-42 174 - 420 multi-dom 223638

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
263801 Not available 228883 249397 57488 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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