PHATRDRAFT_45108 (COG1258)Phaeodactylum tricornutum | Diatom Portal

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45108	chr_6	(COG1258)	212044	213833	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0233

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0179	0.41	2.8 9.5

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
COG1258		Predicted pseudouridylate synthase [Translation, ribosomal structure and biogenesis]	-	179.095	3.54E-50	276 - 564	multi-dom	224178

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	239602	102913	Not available	Not available	AT1G20410.1	329641

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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