PHATRDRAFT_45312 transporter protein with conserved zn ribbon c11c7
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45312	chr_6	transporter protein with conserved zn ribbon c11c7	809783	811618	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0043

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0080	0.29	0.000000000039 26000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CRT-like superfamily		CRT-like; This region is found in proteins related to Plasmodium falciparum chloroquine resistance...	-	37.2229	0.0021144	71 - 172	superfamily	117200
RhaT		Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and...	-	39.0793	0.00192014	97 - 238	multi-dom	223769

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
4100		Not available	Not available	Not available	Not available	Not available	Not available	523388

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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