PHATRDRAFT_45828 sda1 domain containing 1 (SDA1)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_45828	chr_8	sda1 domain containing 1 (SDA1)	399968	402414	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0200

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0192	0.20	0.69 12

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
NUC130_3NT superfamily		NUC130/3NT domain; This N terminal domain is found in a novel nucleolar protein family.	-	35.2289	0.00964978	139 - 157	superfamily	254637
SDA1		SDA1; This family consists of several SDA1 protein homologues. SDA1 is a Saccharomyces cerevisiae...	-	149.813	6.89E-40	505 - 804	multi-dom	253133

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
23187		Not available	202960	193034	242784	Cre06.g277050.t1.1	AT1G13160.1	564068

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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