PHATRDRAFT_4761 xpmc2 prevents mitotic catastrophe 2 homolog (REX4_like)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_4761	chr_1	xpmc2 prevents mitotic catastrophe 2 homolog (REX4_like)	625340	625828	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0133

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0172	0.15	560 11000

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
REX4_like		DEDDh 3'-5' exonuclease domain of RNA exonuclease 4, XPMC2, Interferon Stimulated...	cl10012	225.858	8.25E-76	1 - 155	specific	99847
DnaQ_like_exo superfamily		DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like...	-	225.858	8.25E-76	1 - 155	superfamily	263941

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	270059	140622	235048	Not available	AT3G15080.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments