PHATRDRAFT_49571 alpha 3 frustulin
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_49571 chr_23 alpha 3 frustulin 76394 79396 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0100

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0174
 0.15

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LRR_RI superfamily Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue... - 44.6538 6.21E-05 825 - 914 superfamily 238064
SOG2 superfamily RAM signalling pathway protein; SOG2 proteins in Saccharomyces cerevisiae are involved in cell... - 44.3453 0.000110414 350 - 462 superfamily 255982
LRR_8 Leucine rich repeat; Leucine rich repeat. - 36.3617 0.00454727 829 - 889 multi-dom 258126
LRR_8 Leucine rich repeat; Leucine rich repeat. - 36.3617 0.00454727 829 - 889 multi-dom 258126
DUF3432 Domain of unknown function (DUF3432); This presumed domain is functionally uncharacterized. This... - 35.8875 0.00915235 533 - 626 multi-dom 152349

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
9764 Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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