PHATRDRAFT_50185 pseudouridylate synthase-like 1 (truA)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_50185	chr_27	pseudouridylate synthase-like 1 (truA)	299692	300813	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0073

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0239	0.32	68 7100

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PseudoU_synth superfamily		Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to...	-	197.696	1.06E-60	14 - 367	superfamily	260207
truA		tRNA pseudouridine synthase A; Validated	-	205.761	9.20E-64	8 - 367	multi-dom	234577

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	267406	185158	Not available	Not available	AT1G09800.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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