PHATRDRAFT_5508 kin17 cg5649-pa (Kin17_mid)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_5508 chr_3 kin17 cg5649-pa (Kin17_mid) 417698 418123 +

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0395

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0171
 0.38

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Kin17_mid superfamily Domain of Kin17 curved DNA-binding protein; Kin17_mid is the conserved central 169 residue region... - 145.472 4.74E-45 52 - 142 superfamily 255934
Kin17_mid superfamily Domain of Kin17 curved DNA-binding protein; Kin17_mid is the conserved central 169 residue region... - 145.472 4.74E-45 52 - 142 superfamily 255934
zf-C2H2_jaz Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and... cl17721 31.7735 0.00716293 25 - 50 specific 256888
zf-C2H2_jaz superfamily Zinc-finger double-stranded RNA-binding; This domain family is found in archaea and eukaryotes, and... - 31.7735 0.00716293 25 - 50 superfamily 266790

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
30533 Not available 164453 218968 45067 Cre16.g654350.t1.1 AT1G55460.1 309869

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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