PHATRDRAFT_7893 ribosomal protein s15 (Ribosomal_S15p_S13e)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_7893	chr_4	ribosomal protein s15 (Ribosomal_S15p_S13e)	686172	686426	+

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0233

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0179	0.41	2.8 9.5

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Ribosomal_S15p_S13e		Ribosomal protein S15 (prokaryotic)_S13 (eukaryotic) binds the central domain of 16S rRNA and is...	cl00349	94.107	1.63E-26	4 - 83	specific	238213
S15_NS1_EPRS_RNA-bind superfamily		S15/NS1/EPRS_RNA-binding domain. This short domain consists of a helix-turn-helix structure, which...	-	94.107	1.63E-26	4 - 83	superfamily	260373

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
19818		Not available	269207	299847	456985	Cre06.g264300.t1.2	ATCG01120.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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