PHATRDRAFT_9320 mgc82894 protein (Rpn3_C)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_9320 chr_1 mgc82894 protein (Rpn3_C) 1257292 1258342 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0143

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0165
 0.45

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Rpn3_C superfamily Proteasome regulatory subunit C-terminal; This eukaryotic domain is found at the C-terminus of 26S... - 81.9878 5.95E-20 252 - 301 superfamily 149439
Rpn3_C superfamily Proteasome regulatory subunit C-terminal; This eukaryotic domain is found at the C-terminus of 26S... - 81.9878 5.95E-20 252 - 301 superfamily 149439
PCI PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). cl02111 72.264 4.28E-16 145 - 249 specific 250589
PCI superfamily PCI domain; This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15). - 72.264 4.28E-16 145 - 249 superfamily 261183

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37861 Not available 169740 321825 463036 Cre06.g275650.t1.2 AT1G20200.1 371796

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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